RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FAM201AQ5SY85 155 aa18.28■□□□□ 0.52
CCDC9-201ENST00000221922 RP1L1Q8IWN7 2480 aaPredicted RBP18.28■□□□□ 0.52
CCDC9-201ENST00000221922 RNASEH2CQ8TDP1 164 aaKnown RBP18.28■□□□□ 0.52
CCDC9-201ENST00000221922 PCGF1Q9BSM1 259 aa18.28■□□□□ 0.52
CCDC9-201ENST00000221922 MPDU1O75352 247 aa18.27■□□□□ 0.52
CCDC9-201ENST00000221922 TYMSP04818 313 aa18.27■□□□□ 0.52
CCDC9-201ENST00000221922 GAMTQ14353 236 aa18.27■□□□□ 0.52
CCDC9-201ENST00000221922 TMEM30BQ3MIR4 351 aa18.27■□□□□ 0.52
CCDC9-201ENST00000221922 OR1P1Q8NH06 330 aa18.27■□□□□ 0.52
CCDC9-201ENST00000221922 ZGRF1Q86YA3 2104 aa18.27■□□□□ 0.52
CCDC9-201ENST00000221922 RAI1Q7Z5J4 1906 aaPredicted RBP18.27■□□□□ 0.52
CCDC9-201ENST00000221922 SPTBN2O15020 2390 aa18.27■□□□□ 0.51
CCDC9-201ENST00000221922 PDE6DO43924 150 aa18.27■□□□□ 0.51
CCDC9-201ENST00000221922 WFDC8Q8IUA0 241 aa18.27■□□□□ 0.51
CCDC9-201ENST00000221922 OR4S2Q8NH73 311 aa18.27■□□□□ 0.51
CCDC9-201ENST00000221922 OR5R1Q8NH85 324 aa18.27■□□□□ 0.51
CCDC9-201ENST00000221922 TMEM170AQ8WVE7 144 aa18.27■□□□□ 0.51
CCDC9-201ENST00000221922 PLCE1Q9P212 2302 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 SELLP14151 372 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 TMPRSS3P57727 454 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 PRR30Q53SZ7 412 aaPredicted RBP18.26■□□□□ 0.51
CCDC9-201ENST00000221922 LINC00469Q8N7U9 141 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 OR2T10Q8NGZ9 312 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 ACY3Q96HD9 319 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 GAFA1Q96PS6 74 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 SH3BGRL2Q9UJC5 107 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 DYSFO75923 2080 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 DVL1O14640 695 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 TMPRSS2O15393 492 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 THBDP07204 575 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 VDAC2P45880 294 aaPredicted RBP18.26■□□□□ 0.51
CCDC9-201ENST00000221922 PDLIM4P50479 330 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 RBPJQ06330 500 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 SSX9Q7RTT3 188 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 DDB2Q92466 427 aa18.26■□□□□ 0.51
CCDC9-201ENST00000221922 DPRXA6NFQ7 191 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 PRSS46E5RG02 174 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 SLC31A2O15432 143 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 CD99P14209 185 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 OPRK1P41145 380 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 THBS3P49746 956 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 DEFA6Q01524 100 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 GCSAMLQ5JQS6 135 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 ACTL10Q5JWF8 245 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 ZNF788Q6ZQV5 615 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 ADTRPQ96IZ2 230 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 KCNIP2Q9NS61 270 aa18.25■□□□□ 0.51
CCDC9-201ENST00000221922 CEP295Q9C0D2 2601 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 A0A1W2PPQ1 181 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 GFRA3O60609 400 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 IGHV3-7P01780 117 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 AMBPP02760 352 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 PKIAP61925 76 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 GNB1P62873 340 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 TEX36Q5VZQ5 186 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 LINC01551Q86U37 167 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 TRAV38-1A0A0B4J264 116 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 XKRY2A2RUG3 117 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 TNFRSF1AP19438 455 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 JOSD1Q15040 202 aaPredicted RBP18.24■□□□□ 0.51
CCDC9-201ENST00000221922 CT45A1Q5HYN5 189 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 TREML4Q6UXN2 200 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 CT45A3Q8NHU0 189 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 LINC00574Q9H8X3 128 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 TMEM140Q9NV12 185 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 IDI2-AS1Q9NZ38 188 aa18.24■□□□□ 0.51
CCDC9-201ENST00000221922 BSNQ9UPA5 3926 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 IFNA10P01566 189 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 FAM87AP0C7U9 286 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 GPX4P36969 197 aaPredicted RBP18.23■□□□□ 0.51
CCDC9-201ENST00000221922 LCN2P80188 198 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 RELBQ01201 579 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 BSPH1Q075Z2 132 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 DEFB108BQ8NET1 73 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 CORO2AQ92828 525 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 ATMQ13315 3056 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 DMXL2Q8TDJ6 3036 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 ICE1Q9Y2F5 2266 aa18.23■□□□□ 0.51
CCDC9-201ENST00000221922 A0A1W2PPV4 95 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 F6UZH7 168 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 ADIPOQQ15848 244 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 KCNIP4Q6PIL6 250 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 CCL13Q99616 98 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 HEYLQ9NQ87 328 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-201ENST00000221922 SAA2-SAA4A0A096LPE2 208 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 RRHO14718 337 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 SAA2P0DJI9 122 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-201ENST00000221922 ATP5G3P48201 142 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 TXNDC17Q9BRA2 123 aa18.22■□□□□ 0.51
CCDC9-201ENST00000221922 MAP1BP46821 2468 aaKnown RBP18.21■□□□□ 0.51
CCDC9-201ENST00000221922 NKX6-3A6NJ46 265 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 UCNP55089 124 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 MRPS11P82912 194 aaKnown RBP18.21■□□□□ 0.51
CCDC9-201ENST00000221922 CLEC12BQ2HXU8 276 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 DUX4L9Q6RFH8 374 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-201ENST00000221922 ZNF439Q8NDP4 499 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 LEAP2Q969E1 77 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 IMMP2LQ96T52 175 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 MGST2Q99735 147 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 TET2Q6N021 2002 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms