RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ANXA7P20073 488 aaKnown RBP18.53■□□□□ 0.56
HOMER3-201ENST00000221222 PPIFP30405 207 aaKnown RBP18.53■□□□□ 0.56
HOMER3-201ENST00000221222 C10orf55Q5SWW7 151 aa18.53■□□□□ 0.56
HOMER3-201ENST00000221222 C10orf99Q6UWK7 81 aa18.53■□□□□ 0.56
HOMER3-201ENST00000221222 ZNF329Q86UD4 541 aa18.53■□□□□ 0.56
HOMER3-201ENST00000221222 COMMD1Q8N668 190 aa18.53■□□□□ 0.56
HOMER3-201ENST00000221222 MINDY2Q8NBR6 621 aa18.53■□□□□ 0.56
HOMER3-201ENST00000221222 DUSP18Q8NEJ0 188 aa18.53■□□□□ 0.56
HOMER3-201ENST00000221222 ENKURQ8TC29 256 aa18.53■□□□□ 0.56
HOMER3-201ENST00000221222 PIGBOS1A0A0B4J2F0 54 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 SNAPC5O75971 98 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 IGHG4P01861 327 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 RPL27AP46776 148 aaKnown RBP18.52■□□□□ 0.55
HOMER3-201ENST00000221222 MECP2P51608 486 aaKnown RBP18.52■□□□□ 0.55
HOMER3-201ENST00000221222 SRSF4Q08170 494 aaKnown RBP18.52■□□□□ 0.55
HOMER3-201ENST00000221222 ECSCRQ19T08 205 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 SHISA2Q6UWI4 295 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 FAM219AQ8IW50 185 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 LGI3Q8N145 548 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 LRTM2Q8N967 370 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 LFNGQ8NES3 379 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 TMEM68Q96MH6 324 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 SPIN2AQ99865 258 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 SPIN2BQ9BPZ2 258 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 PALMDQ9NP74 551 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 PRR13Q9NZ81 148 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 PRNDQ9UKY0 176 aa18.52■□□□□ 0.55
HOMER3-201ENST00000221222 TRAV6A0A075B6T7 132 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 C9orf170A2RU37 121 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 MSGN1A6NI15 193 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 DHRS2Q13268 280 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 UNQ5815/PRO19632Q6UWF5 114 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 NRARPQ7Z6K4 114 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 OR4X2Q8NGF9 303 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 RRNAD1Q96FB5 475 aaKnown RBP18.51■□□□□ 0.55
HOMER3-201ENST00000221222 COMMD5Q9GZQ3 224 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 TMEM14BQ9NUH8 114 aa18.51■□□□□ 0.55
HOMER3-201ENST00000221222 TET2Q6N021 2002 aaPredicted RBP18.51■□□□□ 0.55
HOMER3-201ENST00000221222 A0A0B4J2A0 478 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 C15orf61A6NNL5 157 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 FBXO24O75426 580 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 HLA-AP01891 365 aaKnown RBP18.5■□□□□ 0.55
HOMER3-201ENST00000221222 H2AFB2P0C5Z0 115 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 ANKRD55Q3KP44 614 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 TCTEX1D4Q5JR98 221 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 ASPHD1Q5U4P2 390 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 TEX38Q6PEX7 206 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 LYG2Q86SG7 212 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 SLC35G3Q8N808 338 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 LSM10Q969L4 123 aaKnown RBP18.5■□□□□ 0.55
HOMER3-201ENST00000221222 PHB2Q99623 299 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 FKBP11Q9NYL4 201 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 SHPKQ9UHJ6 478 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 FOXA2Q9Y261 457 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-201ENST00000221222 NSG2Q9Y328 171 aa18.5■□□□□ 0.55
HOMER3-201ENST00000221222 A0A0G2JRQ6 117 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 A0A1B0GW64 132 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 E7EUB6 86 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 IGLV1-40P01703 118 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 CD28P10747 220 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 MYOD1P15172 320 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 OR2B8PP59922 312 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 FOXE3Q13461 319 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 RNF152Q8N8N0 203 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 OR4A16Q8NH70 328 aa18.49■□□□□ 0.55
HOMER3-201ENST00000221222 DUXBA0A1W2PPF3 345 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 CGB1A6NKQ9 187 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 TEX22C9J3V5 150 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 ELANEP08246 267 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 CD83Q01151 205 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 IZUMO4Q1ZYL8 232 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 C4orf46Q504U0 113 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 ZNF429Q86V71 674 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 OR5M8Q8NGP6 311 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 OR5B3Q8NH48 314 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 RNASE11Q8TAA1 199 aaKnown RBP18.48■□□□□ 0.55
HOMER3-201ENST00000221222 CASTOR1Q8WTX7 329 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 OR51B2Q9Y5P1 312 aa18.48■□□□□ 0.55
HOMER3-201ENST00000221222 A0A0B4J293 547 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 TEX50A0A1B0GTY4 177 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 A0A1W2PN81 502 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 DBX1A6NMT0 343 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 WIPF1O43516 503 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 SOX15O60248 233 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 DUS4LO95620 317 aaKnown RBP18.47■□□□□ 0.55
HOMER3-201ENST00000221222 OPN1MWP04001 364 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 OPN1MW2P0DN77 364 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 OPN1MW3P0DN78 364 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 PSMB8P28062 276 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 CHRNA7P36544 502 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 THOC7Q6I9Y2 204 aaKnown RBP18.47■□□□□ 0.55
HOMER3-201ENST00000221222 LYZL2Q7Z4W2 148 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 C11orf44Q8N8P7 122 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 OR1L8Q8NGR8 309 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 FYTTD1Q96QD9 318 aaKnown RBP18.47■□□□□ 0.55
HOMER3-201ENST00000221222 SRSF8Q9BRL6 282 aaKnown RBP18.47■□□□□ 0.55
HOMER3-201ENST00000221222 QTRT1Q9BXR0 403 aaKnown RBP18.47■□□□□ 0.55
HOMER3-201ENST00000221222 ZNF257Q9Y2Q1 563 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 PKD1L1Q8TDX9 2849 aa18.47■□□□□ 0.55
HOMER3-201ENST00000221222 RAB25P57735 213 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms