RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SS18L2Q9UHA2 77 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 UBE2J1Q9Y385 318 aaPredicted RBP11.41□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF407Q9C0G0 2248 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 TEX48A0A1B0GUV7 120 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 SLC22A20A6NK97 555 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 SYNGR3O43761 229 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 EIF3IQ13347 325 aaKnown RBP11.41□□□□□ -0.58
GABPB1-201ENST00000220429 GABRA6Q16445 453 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 TBR1Q16650 682 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 SPINK14Q6IE38 97 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 MRPL54Q6P161 138 aaKnown RBP11.41□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF525Q8N782 197 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 SPTSSAQ969W0 71 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 SLC7A10Q9NS82 523 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 NAT8BQ9UHF3 227 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 OR11H12B2RN74 326 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 GPM6AP51674 278 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 LGALS4P56470 323 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 TGFBR3Q03167 851 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 AAED1Q7RTV5 226 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 SCCPDHQ8NBX0 429 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 OR11H1Q8NG94 326 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 OR2K2Q8NGT1 345 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 OR11H2Q8NH07 326 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 BLNKQ8WV28 456 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 PP6455Q8WZ26 134 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 C9orf118A6NHY6 69 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 F2RL2O00254 374 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 DEGS1O15121 323 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 LIPFP07098 398 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 PATE4P0C8F1 98 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 CD59P13987 128 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 B4GALT1P15291 398 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 GNB1P62873 340 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 PIGTQ969N2 578 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 JMJD8Q96S16 334 aa11.4□□□□□ -0.58
GABPB1-201ENST00000220429 CTXND1A0A1B0GTU2 59 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 FAM181BA6NEQ2 426 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 ZNF207O43670 478 aaKnown RBP11.39□□□□□ -0.59
GABPB1-201ENST00000220429 NDUFB4O95168 129 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 CLEC3BP05452 202 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 FCGR2AP12318 317 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 PLA2G5P39877 138 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 PPOXP50336 477 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 UBE2G1P62253 170 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
GABPB1-201ENST00000220429 PLCXD3Q63HM9 321 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 EBLN2Q6P2I7 272 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 ZNF841Q6ZN19 808 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 OR8B3Q8NGG8 313 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 OR8B2Q96RD0 313 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 LINC00470Q9BZP3 86 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 PCNX2A6NKB5 2137 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 A0A1W2PR80 420 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 PSMB11A5LHX3 300 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 PDE6DO43924 150 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 FTH1P19P0C7X4 201 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 ZNF32P17041 273 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 VDAC1P21796 283 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 SSTR5P35346 364 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 TMEM249Q2WGJ8 235 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 ZNF439Q8NDP4 499 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
GABPB1-201ENST00000220429 A0A087X0K7 114 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 CDX4O14627 284 aaPredicted RBP11.38□□□□□ -0.59
GABPB1-201ENST00000220429 NEURL1O76050 574 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 AGFG2O95081 481 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 NAPSAO96009 420 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 MT-ND6P03923 174 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 MEF2CQ06413 473 aaPredicted RBP11.38□□□□□ -0.59
GABPB1-201ENST00000220429 NMSQ5H8A3 153 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 PLA2G2CQ5R387 149 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 OR1F12Q8NHA8 337 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 FGFBP3Q8TAT2 258 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 C10orf35Q96D05 121 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 PERPQ96FX8 193 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 FAM110AQ9BQ89 295 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 H3BUT2 72 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 SRIP30626 198 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 PRSS12P56730 875 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 SEC11AP67812 179 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 CEACAM16Q2WEN9 425 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 FOXB1Q99853 325 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 ARL2-SNX15V9GYD0 113 aa11.38□□□□□ -0.59
GABPB1-201ENST00000220429 TMEM189A5PLL7 270 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 SLC17A3O00476 420 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 CRYAAP02489 173 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 STAG3L2P0CL84 134 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 ARL16Q0P5N6 197 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 APOBEC3DQ96AK3 386 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-201ENST00000220429 QTRT1Q9BXR0 403 aaKnown RBP11.37□□□□□ -0.59
GABPB1-201ENST00000220429 HES7Q9BYE0 225 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 BOKQ9UMX3 212 aaPredicted RBP11.37□□□□□ -0.59
GABPB1-201ENST00000220429 TRBV7-9A0A0J9YWB2 115 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 CRYBB3P26998 211 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 HERV-K104P61576 105 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 KRTAP27-1Q3LI81 207 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms