RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SCTP09683 121 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 FHITP49789 147 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 MEF2CQ06413 473 aaPredicted RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 SPINK9Q5DT21 86 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 HES3Q5TGS1 186 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 FAM222BQ8WU58 562 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 RTBDNQ9BSG5 229 aaPredicted RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 NDUFAF3Q9BU61 184 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 LPAR2Q9HBW0 351 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 TINAGQ9UJW2 476 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 TBL2Q9Y4P3 447 aaKnown RBP3.77□□□□□ -1.81
CHD9-201ENST00000219084 TMEM262E9PQX1 116 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 IL4P05112 153 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 CD5P06127 495 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SRIP30626 198 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 NMUP48645 174 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 ARF6P62330 175 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 TBR1Q16650 682 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 ALKBH6Q3KRA9 238 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 CENPWQ5EE01 88 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 Q6ZS49 121 aa3.77□□□□□ -1.81
CHD9-201ENST00000219084 SPTBN1Q01082 2364 aaKnown RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 MOSPD3O75425 235 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 CELA2BP08218 269 aaPredicted RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 COX6A1P12074 109 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 KLK2P20151 261 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 ID4P47928 161 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 DLX6P56179 175 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 SEC11AP67812 179 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 UNC119Q13432 240 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TTC32Q5I0X7 151 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 Q6ZS52 159 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 PNKDQ8N490 385 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 FAM89BQ8N5H3 189 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TMEM52Q8NDY8 209 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 C2orf88Q9BSF0 95 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TMUB1Q9BVT8 246 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 EML6Q6ZMW3 1958 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TRBV24-1A0A075B6N3 115 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 A0A1B0GUT8 65 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 LGALS3P17931 250 aaKnown RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 CACNG7P62955 275 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 KHDC1LQ5JSQ8 128 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 OSTCQ9NRP0 149 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TCF19Q9Y242 345 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 BRWD1Q9NSI6 2320 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 IGKV3D-11A0A0A0MRZ8 115 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 OR4C46A6NHA9 309 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 PRKNO60260 465 aaPredicted RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 FOXL1Q12952 345 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 PMS2CLQ68D20 193 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 CLEC7AQ9BXN2 247 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 WNT5BQ9H1J7 359 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 SDF2L1Q9HCN8 221 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 PLA2G3Q9NZ20 509 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 A0A0J9YW62 118 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 H0YL77 283 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 LMX1BO60663 402 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 CCL2P13500 99 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 MMDQ15546 238 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 MAFAQ8NHW3 353 aaPredicted RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 ZNF385AQ96PM9 386 aaKnown RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 HDHD3Q9BSH5 251 aaPredicted RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 MS4A6AQ9H2W1 248 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 RPP21Q9H633 154 aaKnown RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 CENPVL1A0A0U1RR11 272 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 C9JCJ5 164 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 ACP7Q6ZNF0 438 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 BEND2Q8NDZ0 799 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 PLPPR1Q8TBJ4 325 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TMEM208Q9BTX3 173 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 AICDAQ9GZX7 198 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 ZNF407Q9C0G0 2248 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 B9A039 149 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 ANOS1P23352 680 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 RUNX1Q01196 453 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 SNAI3Q3KNW1 292 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 BIVMQ86UB2 503 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 MUC15Q8N387 334 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 EEF1AKMT3Q96AZ1 226 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 PRR13Q9NZ81 148 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TRIOBPQ9H2D6 2365 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 KLK10O43240 276 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 CSN3P07498 182 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 SNRPD3P62318 126 aaKnown RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 HIST1H1AQ02539 215 aaPredicted RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 EGR4Q05215 589 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 CXorf66Q5JRM2 361 aaPredicted RBP3.76□□□□□ -1.81
CHD9-201ENST00000219084 PCSK4Q6UW60 755 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 HEPN1Q6WQI6 88 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TNFRSF14Q92956 283 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 C16orf92Q96LL3 132 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 SMOC1Q9H4F8 434 aa3.76□□□□□ -1.81
CHD9-201ENST00000219084 TRBV6-6A0A0A6YYG2 114 aa3.75□□□□□ -1.81
CHD9-201ENST00000219084 TM4SF20Q53R12 229 aa3.75□□□□□ -1.81
CHD9-201ENST00000219084 NIT1Q86X76 327 aa3.75□□□□□ -1.81
CHD9-201ENST00000219084 MBD3L1Q8WWY6 194 aa3.75□□□□□ -1.81
CHD9-201ENST00000219084 ZNF488Q96MN9 340 aa3.75□□□□□ -1.81
CHD9-201ENST00000219084 PRELID3AQ96N28 172 aa3.75□□□□□ -1.81
CHD9-201ENST00000219084 REPIN1Q9BWE0 567 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms