RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Rhox7aA2A4F1 281 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 AsmtD3KU66 387 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gm10638F6QEG2 257 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Mcpt8P43430 247 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Hhipl1Q14DK5 791 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Lhfpl1Q80SV1 220 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Srsf7Q8BL97 267 aaKnown RBP12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Rnf170Q8CBG9 286 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Nup35Q8R4R6 325 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Tlcd2Q8VC26 310 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 MrgprfQ8VCJ6 343 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr1239Q8VGM8 305 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr181Q8VGQ7 317 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Osr2Q91ZD1 312 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Dok5Q91ZM9 306 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 MmachcQ9CZD0 279 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Reg4Q9D8G5 157 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 MioxQ9QXN5 285 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Opn4Q9QXZ9 521 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Dock9Q8BIK4 2055 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Col27a1Q5QNQ9 1845 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Slc25a53A2AF28 346 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Samt1A2BED8 237 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gm15140A2BEE3 237 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gm4175D3YTW8 314 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr64F8VPZ8 307 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vmn1r114L7N226 321 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vmn1r126L7N2C8 321 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Mas1P30554 324 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Foxa2P35583 459 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 CamlgP49070 294 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Pcbd1P61458 104 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ear1P97426 155 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 PkibQ04758 92 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Npy4rQ61041 375 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr1396Q7TQS8 315 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Nmes1Q810Q5 83 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Sulf2Q8CFG0 875 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Degs2Q8R2F2 323 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr186Q8VEX5 309 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr860Q8VFF7 317 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ear10Q923L6 156 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Slc25a10Q9QZD8 287 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Plxnb1Q8CJH3 2119 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Tcrg-C4A0A075B6C7 190 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Trbv5A0A0B4J1G9 113 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vmn1r128L7N2B4 307 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 TectbO08524 329 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Fbxo7Q3U7U3 523 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 BB287469Q3UT53 144 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Apobec4Q497M3 374 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Klk1b21Q61759 261 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Coq2Q66JT7 374 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cd200r1lQ6XJV6 249 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Alkal2Q80UG6 151 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Tmem251Q8BH26 163 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Pla2g16Q8R3U1 162 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr1259Q8VEZ1 309 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr654Q8VF27 341 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Bcl2l14Q9CPT0 328 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Msmo1Q9CRA4 293 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Borcs8Q9D6Y4 120 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Mmp1aQ9EPL5 464 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Kcnip1Q9JJ57 227 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr159Q9QZ19 319 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 Syt7Q9R0N7 403 aa12.84□□□□□ -0.35
Nup54-201ENSMUST00000038514 SvilQ8K4L3 2170 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Eml6Q5SQM0 1958 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm17333C6EQI3 125 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Olfr895L7N210 316 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Dvl1P51141 695 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 B3gat2P59270 324 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Isoc2aP85094 206 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Snrnp70Q62376 448 aaKnown RBP12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Lefty1Q64280 368 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Olfr1299Q7TQX5 312 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Q8VCE4 163 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Olfr507Q8VG13 316 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Bcdin3dQ91YP1 285 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Mansc1Q9CR33 414 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Hils1Q9QYL0 170 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Fzr1Q9R1K5 493 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Arpc1bQ9WV32 372 aaKnown RBP12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Igkv13-85A0A075B666 115 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Rpl23a-ps3A0A140T8M7 156 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm39566A0A1B0GT45 1251 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 A0A1Y7VIT9 351 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 OdamA1E960 273 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm12887B1AVM1 119 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm43191F6YIH5 235 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Olfr62L7MU75 315 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Bloc1s1O55102 125 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 PomcP01193 235 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Hist1h2bmP10854 126 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 GzmaP11032 260 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 P18528 98 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Cks2P56390 79 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Fgf12P61329 243 aa12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Rpl23aP62751 156 aaKnown RBP12.83□□□□□ -0.36
Nup54-201ENSMUST00000038514 Gm21943Q5FWD5 227 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms