RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	RPL39P5	Q59GN2	51 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	ABHD12	Q8N2K0	398 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	ACY3	Q96HD9	319 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	GOLT1B	Q9Y3E0	138 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021		A8MWP6	167 aa		11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021	ZNF25	P17030	456 aa	Predicted RBP	11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021	C1orf185	Q5T7R7	199 aa		11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021	CISD2	Q8N5K1	135 aa	Known RBP	11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021	LRRC29	Q8WV35	223 aa		11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021	LAMA5	O15230	3695 aa		11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021	SMG1	Q96Q15	3661 aa	Known RBP	11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021	PTPRB	P23467	1997 aa		11.46	□□□□□ -0.58
PHGDH-233	ENST00000642021		A8MXE2	369 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	SPINT2	O43291	252 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	PRDX2	P32119	198 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	GPR12	P47775	334 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	TNFSF10	P50591	281 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	RPL15	P61313	204 aa	Known RBP	11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	GUSBP1	Q15486	140 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	MIC13	Q5XKP0	118 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	C1orf159	Q96HA4	380 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	MGST2	Q99735	147 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	MS4A5	Q9H3V2	200 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021		A0A0U1RQK1	487 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021		A0A1W2PPV4	95 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	ZNF320	A2RRD8	509 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	MKRN2OS	H3BPM6	223 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	HTD2	P86397	168 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	TRIP6	Q15654	476 aa	Known RBP	11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	SMIM21	Q3B7S5	101 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	MORN2	Q502X0	79 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	HES3	Q5TGS1	186 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	PRAMEF5	Q5TYX0	476 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	C9orf106	Q8NAJ2	232 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	TMEM178A	Q8NBL3	297 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	GNG12	Q9UBI6	72 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	IGKV1D-17	A0A075B6S4	117 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	ZNF891	A8MT65	544 aa	Predicted RBP	11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	PRSS46	E5RG02	174 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	AQP7	O14520	342 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	TMPRSS2	O15393	492 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	PDE6D	O43924	150 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	SOX15	O60248	233 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	NUPR1	O60356	82 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	SNRPC	P09234	159 aa	Known RBP	11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	ARL14EPL	P0DKL9	152 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	KITLG	P21583	273 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	VDAC2	P45880	294 aa	Predicted RBP	11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	SPRN	Q5BIV9	151 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	TMEM144	Q7Z5S9	345 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	FAM90A1	Q86YD7	464 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	RAB1C	Q92928	201 aa		11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021	HEYL	Q9NQ87	328 aa	Predicted RBP	11.45	□□□□□ -0.58
PHGDH-233	ENST00000642021		M0R1X1	148 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	GFRA3	O60609	400 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	HPRT1	P00492	218 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	ADH4	P08319	380 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	HNF1A	P20823	631 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	SRSF6	Q13247	344 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	MSMP	Q1L6U9	139 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	CNN1	P51911	297 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	RELB	Q01201	579 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	KCNIP4	Q6PIL6	250 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	TCF23	Q7RTU1	214 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	TMEM256	Q8N2U0	113 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	OR4A16	Q8NH70	328 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	KCNIP2	Q9NS61	270 aa		11.44	□□□□□ -0.58
PHGDH-233	ENST00000642021	HCFC1	P51610	2035 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	CAD	P27708	2225 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	IGHV3OR15-7	A0A075B7D8	119 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	HSBP1L1	C9JCN9	74 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	GCG	P01275	180 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	OR4A8	P0C604	315 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	LCN2	P80188	198 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	TMEM249	Q2WGJ8	235 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	LRP11	Q86VZ4	500 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	ZNRF1	Q8ND25	227 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	SGMS2	Q8NHU3	365 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	SSMEM1	Q8WWF3	244 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	LEAP2	Q969E1	77 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	GGTLC1	Q9BX51	225 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	DUSP13	Q9UII6	198 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	PXMP4	Q9Y6I8	212 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	SCO2	A0A1W2PP80	73 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	STAG3L2	P0CL84	134 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	STAG3L3	P0CL85	134 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	OPRK1	P41145	380 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	LOXL3	P58215	753 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	OR2Z1	Q8NG97	314 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	TRAPPC1	Q9Y5R8	145 aa		11.43	□□□□□ -0.58
PHGDH-233	ENST00000642021	ZNF718	Q3SXZ3	478 aa		11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	SPATA31B1P	Q5VZV4	182 aa		11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	MRPL41	Q8IXM3	137 aa	Known RBP	11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	GBGT1	Q8N5D6	347 aa		11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	OCC1	Q8TAD7	63 aa		11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	TMEM18	Q96B42	140 aa		11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	SFRP2	Q96HF1	295 aa		11.42	□□□□□ -0.58
PHGDH-233	ENST00000642021	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms