RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-229	ENST00000641891	TRAV38-1	A0A0B4J264	116 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	CTXND1	A0A1B0GTU2	59 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	hADV38S2	A0JD32	116 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	C15orf61	A6NNL5	157 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	C1orf196	B1AJZ1	125 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	TMEM178B	H3BS89	294 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	RAB5B	P61020	215 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	RNF212	Q495C1	297 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	GCSAML	Q5JQS6	135 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	ZNF343	Q6P1L6	599 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	LYPD2	Q6UXB3	125 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	SLC25A48	Q6ZT89	311 aa	Known RBP	13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	BIN3	Q9NQY0	253 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	WDR83OS	Q9Y284	106 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	LINC00312	Q9Y6C7	94 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	PRSS46	E5RG02	174 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891		E7EQL1	145 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	RPL35	P42766	123 aa	Known RBP	13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	RPL31	P62899	125 aa	Known RBP	13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	SLC35E3	Q7Z769	313 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	RAB24	Q969Q5	203 aa		13.9	□□□□□ -0.18
PHGDH-229	ENST00000641891	PPIAL4E	A0A075B759	164 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	TRGV8	A0A0C4DH27	118 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	PPIAL4D	F5H284	164 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	IGKV1-16	P04430	117 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	CT45A6	P0DMU7	189 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	CT45A5	P0DMU8	189 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	CT45A7	P0DMV0	189 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	PPIAL4F	P0DN26	164 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	AKR1D1	P51857	326 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	CD81	P60033	236 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	PPIAL4A	Q9Y536	164 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	CEP295	Q9C0D2	2601 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	IFNA1	P01562	189 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	MB	P02144	154 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	AGA	P20933	346 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	RBPJ	Q06330	500 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	IQCF2	Q8IXL9	164 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	MS4A5	Q9H3V2	200 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	TMEM14B	Q9NUH8	114 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	TMEM106B	Q9NUM4	274 aa		13.89	□□□□□ -0.19
PHGDH-229	ENST00000641891	ROS1	P08922	2347 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	C17orf112	F2Z3M2	114 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	RPP30	P78346	268 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	TMEM200B	Q69YZ2	307 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	TREML4	Q6UXN2	200 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	H1FX	Q92522	213 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	RNASE6	Q93091	150 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	ADTRP	Q96IZ2	230 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	P2RX4	Q99571	388 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	FOXA2	Q9Y261	457 aa	Predicted RBP	13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	URGCP-MRPS24	S4R325	110 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891		A0A087WWC5	75 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	SRRM4	A7MD48	611 aa	Known RBP	13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	HINT2	Q9BX68	163 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	DYNLRB1	Q9NP97	96 aa		13.88	□□□□□ -0.19
PHGDH-229	ENST00000641891	OPN1MW	P04001	364 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	IFNA4	P05014	189 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	OPN1MW2	P0DN77	364 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	OPN1MW3	P0DN78	364 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	SNRPE	P62304	92 aa	Known RBP	13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	MEF2B	Q02080	365 aa	Predicted RBP	13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	NCMAP	Q5T1S8	102 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	HEPN1	Q6WQI6	88 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	C1orf87	Q8N0U7	546 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	OR13D1	Q8NGV5	346 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	MGST2	Q99735	147 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	VKORC1	Q9BQB6	163 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	SLC35D1	Q9NTN3	355 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	CTSZ	Q9UBR2	303 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	MSRB2	Q9Y3D2	182 aa		13.87	□□□□□ -0.19
PHGDH-229	ENST00000641891	PLAU	P00749	431 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	MAS1L	P35410	378 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	RBMS3	Q6XE24	437 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	LINC00518	Q8N0U6	118 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891		Q8WTZ3	238 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	C1orf159	Q96HA4	380 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	ZNF714	Q96N38	554 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	MRPL20	Q9BYC9	149 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	GAL3ST2	Q9H3Q3	398 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	OR51B2	Q9Y5P1	312 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	YIF1A	O95070	293 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	LY86	O95711	162 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	CXCL1	P09341	107 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	CDC34	P49427	236 aa	Predicted RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	HSPE1	P61604	102 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	MEF2C	Q06413	473 aa	Predicted RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	PMS2P11	Q13670	270 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	ZNF674	Q2M3X9	581 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	WDR25	Q64LD2	544 aa	Predicted RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	PATZ1	Q9HBE1	687 aa	Known RBP	13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	RAX	Q9Y2V3	346 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	PTPRQ	Q9UMZ3	2332 aa		13.86	□□□□□ -0.19
PHGDH-229	ENST00000641891	TNFRSF13B	O14836	293 aa	Predicted RBP	13.85	□□□□□ -0.19
PHGDH-229	ENST00000641891	HRAS	P01112	189 aa		13.85	□□□□□ -0.19
PHGDH-229	ENST00000641891	REG1B	P48304	166 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms