RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 IFNA5P01569 189 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 IGKV1-5P01602 117 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 IGHV4-39P01824 125 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 LIPFP07098 398 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 P0C879 139 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 IGHV1-8P0DP01 117 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 COX7A1P24310 79 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 TAGLN2P37802 199 aaKnown RBP7.24□□□□□ -1.25
PHGDH-219ENST00000641513 KIR2DS2P43631 304 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 DLX6P56179 175 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 ERVK-16P61578 105 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 IZUMO4Q1ZYL8 232 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 KHDC3LQ587J8 217 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 CXorf66Q5JRM2 361 aaPredicted RBP7.24□□□□□ -1.25
PHGDH-219ENST00000641513 AKR1C8PQ5T2L2 129 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 SLC25A48Q6ZT89 311 aaKnown RBP7.24□□□□□ -1.25
PHGDH-219ENST00000641513 H2BFWTQ7Z2G1 175 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 CENPVQ7Z7K6 275 aaPredicted RBP7.24□□□□□ -1.25
PHGDH-219ENST00000641513 ODF3L1Q8IXM7 274 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 ABHD12Q8N2K0 398 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 HSD17B11Q8NBQ5 300 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 FAM213BQ8TBF2 198 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 CD300LFQ8TDQ1 290 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 PINX1Q96BK5 328 aaKnown RBP7.24□□□□□ -1.25
PHGDH-219ENST00000641513 ADTRPQ96IZ2 230 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 SH3BGRL3Q9H299 93 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 TMEM133Q9H2Q1 129 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 TMEM231Q9H6L2 316 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 CACNG5Q9UF02 275 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 GAB2Q9UQC2 676 aa7.24□□□□□ -1.25
PHGDH-219ENST00000641513 RBFOX3A6NFN3 312 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 B4DEV8 164 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 C22orf46C9J442 243 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 J3QR06 171 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 CHST1O43916 411 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 IL3RAP26951 378 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 PPT1P50897 306 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 DYNLT3P51808 116 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 PRRX1P54821 245 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 ATP5J2P56134 94 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 DLX1P56177 255 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 RAB5BP61020 215 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 ARF6P62330 175 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 PRB3Q04118 309 aaPredicted RBP7.23□□□□□ -1.25
PHGDH-219ENST00000641513 ATP6V1FQ16864 119 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 AARDQ4LEZ3 155 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 TMEM88Q6PEY1 159 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 SPSB3Q6PJ21 355 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 TMEM182Q6ZP80 229 aaPredicted RBP7.23□□□□□ -1.25
PHGDH-219ENST00000641513 C1orf229Q6ZS94 237 aaPredicted RBP7.23□□□□□ -1.25
PHGDH-219ENST00000641513 SSX9Q7RTT3 188 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 C1QL4Q86Z23 238 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 OR4S2Q8NH73 311 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 OR9G1Q8NH87 305 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 MBD3L1Q8WWY6 194 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 R3HDM4Q96D70 268 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 PERPQ96FX8 193 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 PIMREGQ9BSJ6 248 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 BPESC1Q9GZL8 116 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 CFAP46Q8IYW2 2715 aa7.23□□□□□ -1.25
PHGDH-219ENST00000641513 USP9XQ93008 2570 aaPredicted RBP7.22□□□□□ -1.25
PHGDH-219ENST00000641513 C7orf77A4D0Y5 90 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 CXorf65A6NEN9 183 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 J3QKU1 62 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 PROP1O75360 226 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 HPRT1P00492 218 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 IGHV2-5P01817 119 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 APOA2P02652 100 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 PLA2G2AP14555 144 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 COL8A1P27658 744 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 REG1BP48304 166 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 BRWD1-AS2P59051 145 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 LCN2P80188 198 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 RTL8BQ17RB0 113 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 AWAT1Q58HT5 328 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 SOHLH1Q5JUK2 328 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 CLEC2AQ6UVW9 174 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 Q6ZRM9 215 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 SLC35E3Q7Z769 313 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 LINC00518Q8N0U6 118 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF295-AS1Q8N0V1 137 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 PNKDQ8N490 385 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF383Q8NA42 475 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 C8orf46Q8TAG6 207 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 FAM168AQ92567 244 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 NRGNQ92686 78 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 TMEM186Q96B77 213 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 CIB3Q96Q77 187 aaPredicted RBP7.22□□□□□ -1.25
PHGDH-219ENST00000641513 P2RX4Q99571 388 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF251Q9BRH9 671 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 CLEC7AQ9BXN2 247 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
PHGDH-219ENST00000641513 SIRT7Q9NRC8 400 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 SLC35D1Q9NTN3 355 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 HSPB7Q9UBY9 170 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 AKAP6Q13023 2319 aa7.22□□□□□ -1.25
PHGDH-219ENST00000641513 DCHS2Q6V1P9 2916 aa7.21□□□□□ -1.25
PHGDH-219ENST00000641513 IGHV2-26A0A0B4J1V2 119 aa7.21□□□□□ -1.26
PHGDH-219ENST00000641513 MARCH11A6NNE9 402 aa7.21□□□□□ -1.26
PHGDH-219ENST00000641513 C1orf196B1AJZ1 125 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms