RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 ETV7Q9Y603 341 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
LINC00339-211ENST00000641009 A0A1B0GW64 132 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 PPP5D1E7EU14 171 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 IL6RP08887 468 aaPredicted RBP10.56□□□□□ -0.72
LINC00339-211ENST00000641009 FCGR2CP31995 323 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 RPL27AP46776 148 aaKnown RBP10.56□□□□□ -0.72
LINC00339-211ENST00000641009 SCAND1P57086 179 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 ADAMTSL5Q6ZMM2 481 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 SSX9Q7RTT3 188 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 SLC25A42Q86VD7 318 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 OR13F1Q8NGS4 319 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 VSTM2AQ8TAG5 236 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 TMEM167AQ8TBQ9 72 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 FYTTD1Q96QD9 318 aaKnown RBP10.56□□□□□ -0.72
LINC00339-211ENST00000641009 CCL28Q9NRJ3 127 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 PEMTQ9UBM1 199 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 ZNF257Q9Y2Q1 563 aa10.56□□□□□ -0.72
LINC00339-211ENST00000641009 HLA-AP01891 365 aaKnown RBP10.55□□□□□ -0.72
LINC00339-211ENST00000641009 MYOD1P15172 320 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 ZNF66Q6ZN08 573 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 GTSCR1Q86UQ5 136 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 HOGA1Q86XE5 327 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 Q8N402 240 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 CITED4Q96RK1 184 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 DPPA5A6NC42 116 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 NPIPB5A8MRT5 1133 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 PPYP01298 95 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 IGHV3-23P01764 117 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 ZNF735P0CB33 412 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 AREGP15514 252 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 EDN2P20800 178 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 TGFBR1P36897 503 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 MECP2P51608 486 aaKnown RBP10.55□□□□□ -0.72
LINC00339-211ENST00000641009 SLC2A9Q9NRM0 540 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 FBXL7Q9UJT9 491 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 DMRT1Q9Y5R6 373 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 S4R3C0 116 aa10.55□□□□□ -0.72
LINC00339-211ENST00000641009 RYR2Q92736 4967 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 A0A0A6YYH2 397 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 MEIS3P1A6NDR6 274 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 A6NJ64 397 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 AIREO43918 545 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 NDUFB8O95169 186 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 HRASP01112 189 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 LYL1P12980 280 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 MAS1LP35410 378 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 FXYD4P59646 89 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 HAGHQ16775 308 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 CD300EQ496F6 205 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-211ENST00000641009 FANCD2OSQ96PS1 177 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 SLC5A7Q9GZV3 580 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 AUNIPQ9H7T9 357 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 TUBA4BQ9H853 241 aa10.54□□□□□ -0.72
LINC00339-211ENST00000641009 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 SULT1C2O00338 296 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 OR2C1O95371 312 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 REG1AP05451 166 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 KIR2DS2P43631 304 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 CD81P60033 236 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 RPL8P62917 257 aaKnown RBP10.53□□□□□ -0.72
LINC00339-211ENST00000641009 TIMM50Q3ZCQ8 353 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 OR4A47Q6IF82 309 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 SPAG16Q8N0X2 631 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 DYNLRB2Q8TF09 96 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 KCTD12Q96CX2 325 aaKnown RBP10.53□□□□□ -0.72
LINC00339-211ENST00000641009 CCDC140Q96MF4 163 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 PLEKHA3Q9HB20 300 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 PALMDQ9NP74 551 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 DIABLOQ9NR28 239 aa10.53□□□□□ -0.72
LINC00339-211ENST00000641009 C2orf70A6NJV1 201 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 GGCTO75223 188 aaKnown RBP10.52□□□□□ -0.73
LINC00339-211ENST00000641009 CRYGCP07315 174 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 CTRB1P17538 263 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 HLA-GP17693 338 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 PSMB6P28072 239 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 MSMO1Q15800 293 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 KCTD21Q4G0X4 260 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 CTRB2Q6GPI1 263 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 CLEC19AQ6UXS0 136 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 ZNF818PQ6ZRF7 136 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 TMEM17Q86X19 198 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 OR5AP2Q8NGF4 316 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 OR2K2Q8NGT1 345 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 EDA2RQ9HAV5 297 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 GAR1Q9NY12 217 aaKnown RBP10.52□□□□□ -0.73
LINC00339-211ENST00000641009 BET1LQ9NYM9 111 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 SELENOKQ9Y6D0 94 aa10.52□□□□□ -0.73
LINC00339-211ENST00000641009 TRAV3A0A0B4J244 114 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 ZNF785A8K8V0 405 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 CD7P09564 240 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 FOLR2P14207 255 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 CATR1Q13166 79 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 DEFB114Q30KQ6 69 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 FAM209BQ5JX69 171 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 ZBTB34Q8NCN2 500 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms