RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 C9JQL5 133 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 IGHV3-43DP0DP04 118 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 DEFA4P12838 97 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 PRDX2P32119 198 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 KRTDAPP60985 99 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 UBE2L3P68036 154 aaKnown RBP4.69□□□□□ -1.66
SCN3A-210ENST00000640652 SPEM2Q0P670 501 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 MRPL52Q86TS9 123 aaKnown RBP4.69□□□□□ -1.66
SCN3A-210ENST00000640652 BCL2L2Q92843 193 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-210ENST00000640652 LY6G6EA0A0G2JKS1 128 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 HES3Q5TGS1 186 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 WDR25Q64LD2 544 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-210ENST00000640652 TMEM170AQ8WVE7 144 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 ZDHHC8Q9ULC8 765 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 U3KQA8 63 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 AQP7O14520 342 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 ZG16O60844 167 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 CXCL1P09341 107 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 SSTR5P35346 364 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 HERPUD1Q15011 391 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 SSX7Q7RTT5 188 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 OR52L2PQ8NGH6 319 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 OR1L6Q8NGR2 347 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 TMEM190Q8WZ59 177 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 MSL2Q9HCI7 577 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 VCANP13611 3396 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 SZT2Q5T011 3432 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 BMP5P22003 454 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 CASP6P55212 293 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 GNB2P62879 340 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 RSPO1Q2MKA7 263 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-210ENST00000640652 PDPNQ86YL7 162 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 CA5BP1Q8WTZ4 195 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 WIPI2Q9Y4P8 454 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 C12orf77C9JDV5 145 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 NEURL1O76050 574 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 TAS2R60P59551 318 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 DEPPQ9NTK1 212 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 USP34Q70CQ2 3546 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 WNT5AP41221 380 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 TLE1Q04724 770 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 HGFACQ04756 655 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 FOXL1Q12952 345 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 MRPL32Q9BYC8 188 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 SAP30LQ9HAJ7 183 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 PATE3B3GLJ2 98 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 OR5G3P0C626 314 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 CT45A10P0DMU9 189 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 MAS1LP35410 378 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 ZXDAP98168 799 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 LIME1Q9H400 295 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 SMOC1Q9H4F8 434 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 HIST1H1EP10412 219 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 OR4P4Q8NGL7 312 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 ZCCHC14Q8WYQ9 949 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 AKIRIN1Q9H9L7 192 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 HES4Q9HCC6 221 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 DYNLRB1Q9NP97 96 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 FZR1Q9UM11 496 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 MPV17P39210 176 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 HNRNPA3P51991 378 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 SOX8P57073 446 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 RPL31P62899 125 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 CCL20P78556 96 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 TNFAIP6P98066 277 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 JOSD1Q15040 202 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 IZUMO4Q1ZYL8 232 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 CLEC12BQ2HXU8 276 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 VMA21Q3ZAQ7 101 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 SPNS3Q6ZMD2 512 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 J3QR06 171 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 AMY1AP04745 511 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 SOD3P08294 240 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF83P51522 516 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 SELENOTP62341 195 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 MRPS11P82912 194 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 PSG5Q15238 335 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 CDCP2Q5VXM1 449 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 TMEM108Q6UXF1 575 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 OR51G1Q8NGK1 321 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 MYO15AQ9UKN7 3530 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 CHEK1O14757 476 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 TM4SF5O14894 197 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 TCAPO15273 167 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 RPL23P62829 140 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 TFF3Q07654 80 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 LRP11Q86VZ4 500 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 OR2V2Q96R30 315 aa4.68□□□□□ -1.66
SCN3A-210ENST00000640652 MRPL37Q9BZE1 423 aaKnown RBP4.68□□□□□ -1.66
SCN3A-210ENST00000640652 MAP1AP78559 2803 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 C15orf61A6NNL5 157 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 AHRRA9YTQ3 701 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 USF1P22415 310 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 OR4A47Q6IF82 309 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 C20orf204Q6ZNR8 217 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 GBGT1Q8N5D6 347 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 OR4X1Q8NH49 305 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 DIRC2Q96SL1 478 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 CDX2Q99626 313 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms