RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 VKORC1L1Q8N0U8 176 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 MUC15Q8N387 334 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 OR52E5Q8NH55 327 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 OR4S2Q8NH73 311 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 CORO2AQ92828 525 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 MAP1LC3BQ9GZQ8 125 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 MS4A5Q9H3V2 200 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 TMEM106BQ9NUM4 274 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 TET2Q6N021 2002 aaPredicted RBP12.39□□□□□ -0.43
TRIM3-215ENST00000639856 SAA2-SAA4A0A096LPE2 208 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 A0A1W2PPE3 182 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 ARG1P05089 322 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 SAA2P0DJI9 122 aaPredicted RBP12.39□□□□□ -0.43
TRIM3-215ENST00000639856 RPS16P62249 146 aaKnown RBP12.39□□□□□ -0.43
TRIM3-215ENST00000639856 HNF4GQ14541 408 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 PDLIM3Q53GG5 364 aaPredicted RBP12.39□□□□□ -0.43
TRIM3-215ENST00000639856 ACSM6Q6P461 480 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 ZNF439Q8NDP4 499 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 RAB39BQ96DA2 213 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
TRIM3-215ENST00000639856 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
TRIM3-215ENST00000639856 YLPM1P49750 1951 aaKnown RBP12.39□□□□□ -0.43
TRIM3-215ENST00000639856 A0A1W2PPE2 198 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 A0A1W2PPH5 198 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 FCN3O75636 299 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 MDKP21741 143 aaPredicted RBP12.38□□□□□ -0.43
TRIM3-215ENST00000639856 RELBQ01201 579 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 PMS2P11Q13670 270 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 TMEM30BQ3MIR4 351 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 ZNF251Q9BRH9 671 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 MBP02144 154 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 THBS3P49746 956 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 NPCDR1Q9BY65 106 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
TRIM3-215ENST00000639856 TRAV38-1A0A0B4J264 116 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 NDUFA2O43678 99 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 RPP30P78346 268 aaKnown RBP12.37□□□□□ -0.43
TRIM3-215ENST00000639856 MRPS11P82912 194 aaKnown RBP12.37□□□□□ -0.43
TRIM3-215ENST00000639856 C4orf17Q53FE4 359 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 SLC35E3Q7Z769 313 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 C1orf87Q8N0U7 546 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 LYG1Q8N1E2 194 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 ZNF709Q8N972 641 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 ITLN2Q8WWU7 325 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-215ENST00000639856 LHX4Q969G2 390 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 TVP23CQ96ET8 276 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 ADTRPQ96IZ2 230 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 P2RX4Q99571 388 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 BIN3Q9NQY0 253 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 TRAV3A0A0B4J244 114 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 IGHV1-69-2A0A0G2JMI3 117 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 NKX6-3A6NJ46 265 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 LYNX1G3V0Z9 82 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 IFNA1P01562 189 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 LYNX1P0DP58 116 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 NDUFB7P17568 137 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 VDAC2P45880 294 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-215ENST00000639856 RAB5BP61020 215 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 RAB11AP62491 216 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 FFAR4Q5NUL3 377 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 FAM90A2PQ658T7 463 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 LYPD2Q6UXB3 125 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 ZFP82Q8N141 532 aa12.37□□□□□ -0.43
TRIM3-215ENST00000639856 RPUSD1Q9UJJ7 312 aaKnown RBP12.37□□□□□ -0.43
TRIM3-215ENST00000639856 RALYQ9UKM9 306 aaKnown RBP12.37□□□□□ -0.43
TRIM3-215ENST00000639856 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-215ENST00000639856 A0A087WWC5 75 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 CTXND1A0A1B0GTU2 59 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 MMP23AO75900 390 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 OR2C1O95371 312 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 IFNA10P01566 189 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 TAGLN2P37802 199 aaKnown RBP12.36□□□□□ -0.43
TRIM3-215ENST00000639856 DLK1P80370 383 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 ZNF383Q8NA42 475 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 RHOVQ96L33 236 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 HEYLQ9NQ87 328 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-215ENST00000639856 SLC25A10Q9UBX3 287 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-215ENST00000639856 LINC00312Q9Y6C7 94 aa12.36□□□□□ -0.43
TRIM3-215ENST00000639856 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 C17orf112F2Z3M2 114 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 RAB5AP20339 215 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 CD1BP29016 333 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 MAS1LP35410 378 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 GNG10P50151 68 aa12.35□□□□□ -0.43
TRIM3-215ENST00000639856 HABP2Q14520 560 aaPredicted RBP12.35□□□□□ -0.43
TRIM3-215ENST00000639856 SLC25A48Q6ZT89 311 aaKnown RBP12.35□□□□□ -0.43
TRIM3-215ENST00000639856 SLC25A22Q9H936 323 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms