RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 OR5J2Q8NH18 312 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 USMG5Q96IX5 58 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 SPACA5Q96QH8 159 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 HSPB9Q9BQS6 159 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 ZNF426Q9BUY5 554 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 ELL3Q9HB65 397 aaPredicted RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 SLC2A9Q9NRM0 540 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 C1orf109Q9NX04 203 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 BABAM2Q9NXR7 383 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 PYCARDQ9ULZ3 195 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 TIMM22Q9Y584 194 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 IGLV5-39A0A0G2JS06 123 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 IGHV3-64DA0A0J9YX35 117 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 C2orf70A6NJV1 201 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 A8MWP6 167 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 LRRN3E7EW58 273 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 SOCS1O15524 211 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 TNFAIP8O95379 198 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 MOSP00540 346 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 SLPIP03973 132 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 DBIP07108 87 aaKnown RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 PSG2P11465 335 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 HLA-DMAP28067 261 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 RANBP1P43487 201 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 CRYBA2P53672 197 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 KRTAP10-6P60371 365 aaPredicted RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 MRPS25P82663 173 aaKnown RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 ST3GAL3Q11203 375 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 ENDOGQ14249 297 aaKnown RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 FAM162BQ5T6X4 162 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 REG3GQ6UW15 175 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 HEPN1Q6WQI6 88 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 OLIG3Q7RTU3 272 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 C10orf107Q8IVU9 208 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 OR2T33Q8NG76 320 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 OR56B4Q8NH76 319 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 ENKURQ8TC29 256 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 PYROXD1Q8WU10 500 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 PCNPQ8WW12 178 aaKnown RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 MICU1Q9BPX6 476 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 RSG1Q9BU20 258 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 TMEM59Q9BXS4 323 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 INTS9Q9NV88 658 aaKnown RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 MCUBQ9NWR8 336 aa2.32□□□□□ -2.04
CCDC7-213ENST00000639290 THUMPD1Q9NXG2 353 aaKnown RBP2.32□□□□□ -2.04
CCDC7-213ENST00000639290 OR4C46A6NHA9 309 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 NCBP2LA6PVI3 153 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 MPDU1O75352 247 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 PROP1O75360 226 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 ADAP1O75689 374 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 HBE1P02100 147 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 FGGP02679 453 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 CTXN2P0C2S0 81 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 OCM2P0CE71 109 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 FOLR2P14207 255 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 SDC1P18827 310 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 FCGR2CP31995 323 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 RBM34P42696 430 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 AP3S2P59780 193 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 RPS27AP62979 156 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 C5orf64Q2M2E5 130 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 AKIRIN2Q53H80 203 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 IDNKQ5T6J7 187 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 TMEM61Q8N0U2 210 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 OR9G1Q8NH87 305 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 OR1L1Q8NH94 360 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 RNF133Q8WVZ7 376 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 TRUB1Q8WWH5 349 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 SEC22AQ96IW7 307 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 CIB1Q99828 191 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 COPS4Q9BT78 406 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 TM2D1Q9BX74 207 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 SP140LQ9H930 580 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 EHFQ9NZC4 300 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 VAPAQ9P0L0 249 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 LGALS13Q9UHV8 139 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 SAMHD1Q9Y3Z3 626 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 LRRC42Q9Y546 428 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 EXOC1LA0A1B0GW35 172 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 SMIM9A6NGZ8 99 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 NPIPB8E9PQR5 432 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 BHLHE40O14503 412 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 MRPS14O60783 128 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 FAM228BP0C875 321 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 ERP29P30040 261 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 MAGEA3P43357 314 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 GABRA2P47869 451 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 LSM6P62312 80 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 POLR2GP62487 172 aaKnown RBP eCLIP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 ELF3P78545 371 aaPredicted RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 TPBGQ13641 420 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 PSG5Q15238 335 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 SGCAQ16586 387 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 CYP51A1Q16850 503 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 SMIM21Q3B7S5 101 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 RBM48Q5RL73 367 aaKnown RBP2.31□□□□□ -2.04
CCDC7-213ENST00000639290 PDIK1LQ8N165 341 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 ZNRF1Q8ND25 227 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 OR8S1Q8NH09 359 aa2.31□□□□□ -2.04
CCDC7-213ENST00000639290 OR5AK3PQ8NH89 298 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms