RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 LINC00482Q8N8I6 264 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 SRSF12Q8WXF0 261 aaKnown RBP16.92■□□□□ 0.3
SCN1B-206ENST00000638536 P2RX4Q99571 388 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 A0A1B0GW64 132 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 GSTZ1O43708 216 aaPredicted RBP16.92■□□□□ 0.3
SCN1B-206ENST00000638536 HPRT1P00492 218 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 TBPP20226 339 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 SSBP1Q04837 148 aaKnown RBP16.92■□□□□ 0.3
SCN1B-206ENST00000638536 OR4A47Q6IF82 309 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 CMTM1Q8IZ96 169 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 ARRDC1Q8N5I2 433 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 TMEM167AQ8TBQ9 72 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 BORCS5Q969J3 196 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 DGCR14Q96DF8 476 aaKnown RBP16.92■□□□□ 0.3
SCN1B-206ENST00000638536 ALX4Q9H161 411 aaPredicted RBP16.92■□□□□ 0.3
SCN1B-206ENST00000638536 HRASP01112 189 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 F2RP25116 425 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 PPP5CP53041 499 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 DEFA5Q01523 94 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 ZNF79Q15937 498 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 TBC1D26Q86UD7 250 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 MMD2Q8IY49 270 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 OR4C16Q8NGL9 310 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 OR5M8Q8NGP6 311 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 C4orf3Q8WVX3 66 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 UBE2E2Q96LR5 201 aa16.91■□□□□ 0.3
SCN1B-206ENST00000638536 I3L521 148 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 CCL24O00175 119 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 IL6RP08887 468 aaPredicted RBP16.9■□□□□ 0.3
SCN1B-206ENST00000638536 IGLL1P15814 213 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 LPAR6P43657 344 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 SCGB2B2Q4G0G5 96 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 SAMD5Q5TGI4 173 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 LPCAT3Q6P1A2 487 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 CCDC190Q86UF4 302 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 SLC38A6Q8IZM9 456 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 RABL2AQ9UBK7 228 aaPredicted RBP16.9■□□□□ 0.3
SCN1B-206ENST00000638536 RABL2BQ9UNT1 228 aa16.9■□□□□ 0.3
SCN1B-206ENST00000638536 RBMXL2O75526 392 aaKnown RBP16.89■□□□□ 0.29
SCN1B-206ENST00000638536 CD33P20138 364 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 TAS2R31P59538 309 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 TERB2Q8NHR7 220 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 CD300LFQ8TDQ1 290 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 PHB2Q99623 299 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 PLEKHA2Q9HB19 425 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 SLC2A9Q9NRM0 540 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 BET1LQ9NYM9 111 aa16.89■□□□□ 0.29
SCN1B-206ENST00000638536 ANKRD20A5PA0PJZ0 165 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 HMX3A6NHT5 357 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 IGHV3-11P01762 117 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 PGAM2P15259 253 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 NQO2P16083 231 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 SLC6A1P30531 599 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 MYCNOSP40205 109 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 POU2AF1Q16633 256 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 POC5Q8NA72 575 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 VSTM2AQ8TAG5 236 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 MARCH1Q8TCQ1 289 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 ZNF355PQ9NSJ1 428 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 VSIG4Q9Y279 399 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 CGB1A6NKQ9 187 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 TEX22C9J3V5 150 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 ACTL6BO94805 426 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 TPPP2P59282 170 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 DEFA6Q01524 100 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 C19orf35Q6ZS72 473 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 OR11H1Q8NG94 326 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 THAP7Q9BT49 309 aaPredicted RBP16.88■□□□□ 0.29
SCN1B-206ENST00000638536 HRASLSQ9HDD0 168 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 TMEM140Q9NV12 185 aa16.88■□□□□ 0.29
SCN1B-206ENST00000638536 IGKV1-39P01597 117 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 PRH1P02810 166 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 TRGV3P03979 118 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 IGKV1D-39P04432 117 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 AKAIN1P0CW23 69 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 S100A5P33763 92 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 ADAD2Q8NCV1 583 aaKnown RBP16.87■□□□□ 0.29
SCN1B-206ENST00000638536 DMBX1Q8NFW5 382 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 OR13C8Q8NGS7 320 aa16.87■□□□□ 0.29
SCN1B-206ENST00000638536 MARCH11A6NNE9 402 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 UPK2O00526 184 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 KRASP01116 189 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 G6PCP35575 357 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 PIGPP57054 158 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 RPL8P62917 257 aaKnown RBP16.86■□□□□ 0.29
SCN1B-206ENST00000638536 BEAN1Q3B7T3 259 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 PYDC2Q56P42 97 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 OR6Q1Q8NGQ2 317 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 TRIM63Q969Q1 353 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 COMMD9Q9P000 198 aa16.86■□□□□ 0.29
SCN1B-206ENST00000638536 MPPED1O15442 326 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 CREBL2O60519 120 aaPredicted RBP16.85■□□□□ 0.29
SCN1B-206ENST00000638536 HLA-GP17693 338 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 RPL27AP46776 148 aaKnown RBP16.85■□□□□ 0.29
SCN1B-206ENST00000638536 FHL3Q13643 280 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 MEF2DQ14814 521 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 OR51S1Q8NGJ8 323 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 TMEM68Q96MH6 324 aa16.85■□□□□ 0.29
SCN1B-206ENST00000638536 FYTTD1Q96QD9 318 aaKnown RBP16.85■□□□□ 0.29
SCN1B-206ENST00000638536 COA4Q9NYJ1 87 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms