RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FAM25AB3EWG3 89 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 FAM25CB3EWG5 89 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 FAM25GB3EWG6 89 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 HPGDSO60760 199 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 BRWD1-AS2P59051 145 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 RHOGP84095 191 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 DYRK1AQ13627 763 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 C10orf55Q5SWW7 151 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 AADACL3Q5VUY0 350 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 GPR107Q5VW38 600 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 DHRS11Q6UWP2 260 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 ZNF818PQ6ZRF7 136 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 SNX29P2Q8IUI4 249 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 PUSL1Q8N0Z8 303 aaKnown RBP10.62□□□□□ -0.71
PNKP-228ENST00000637325 TTC9CQ8N5M4 171 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 OR51H1Q8NH63 302 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 B9D2Q9BPU9 175 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 MRPS26Q9BYN8 205 aaKnown RBP10.62□□□□□ -0.71
PNKP-228ENST00000637325 NAA50Q9GZZ1 169 aaKnown RBP10.62□□□□□ -0.71
PNKP-228ENST00000637325 HRASLSQ9HDD0 168 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 ANAPC10Q9UM13 185 aa10.62□□□□□ -0.71
PNKP-228ENST00000637325 HMX3A6NHT5 357 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 RBFOX2O43251 390 aaKnown RBP eCLIP10.61□□□□□ -0.711e-6■■■■□ 23.3
PNKP-228ENST00000637325 HPRT1P00492 218 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 PRH1P02810 166 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 NAT1P18440 290 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 HLA-DMAP28067 261 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 TSPAN5P62079 268 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 RPL8P62917 257 aaKnown RBP10.61□□□□□ -0.71
PNKP-228ENST00000637325 ATP5G2Q06055 141 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 TATDN3Q17R31 274 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 ZNF343Q6P1L6 599 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 GPR141Q7Z602 305 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 OR6F1Q8NGZ6 308 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 OR4A5Q8NH83 315 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 CD300LFQ8TDQ1 290 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 MOB3AQ96BX8 217 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 SCPEP1Q9HB40 452 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 BET1LQ9NYM9 111 aa10.61□□□□□ -0.71
PNKP-228ENST00000637325 FAM223BA6NKX1 122 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 GABARAPO95166 117 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 NQO2P16083 231 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 ZNF182P17025 639 aaPredicted RBP10.6□□□□□ -0.71
PNKP-228ENST00000637325 HLA-GP17693 338 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 ELK1P19419 428 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 GNRHRP30968 328 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 HRH1P35367 487 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 TAS2R31P59538 309 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 CTF1Q16619 201 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 RPEL1Q2QD12 228 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 OR4A47Q6IF82 309 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 FAM223AQ8IWN6 122 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 CMTM1Q8IZ96 169 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 DMBX1Q8NFW5 382 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 GPX8Q8TED1 209 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 AKIP1Q9NQ31 210 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 ZNF257Q9Y2Q1 563 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 LSM4Q9Y4Z0 139 aaKnown RBP10.6□□□□□ -0.71
PNKP-228ENST00000637325 COL7A1Q02388 2944 aa10.6□□□□□ -0.71
PNKP-228ENST00000637325 OR2J3O76001 311 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 DHFRP00374 187 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 IL6RP08887 468 aaPredicted RBP10.59□□□□□ -0.71
PNKP-228ENST00000637325 SPNP16150 400 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 S100GP29377 79 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 RCVRNP35243 200 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 SYNJ2BPP57105 145 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 ERVK-16P61578 105 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 ZNF45Q02386 682 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 EXOSC2Q13868 293 aaKnown RBP10.59□□□□□ -0.71
PNKP-228ENST00000637325 LYSMD2Q8IV50 215 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 NECAP1Q8NC96 275 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 SLC2A9Q9NRM0 540 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 ADAM30Q9UKF2 790 aa10.59□□□□□ -0.71
PNKP-228ENST00000637325 TRBV9A0A0B4J1U6 114 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 NPIPB5A8MRT5 1133 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 TEX22C9J3V5 150 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 GPR31O00270 319 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 RBMXL2O75526 392 aaKnown RBP10.58□□□□□ -0.72
PNKP-228ENST00000637325 PGLYRP1O75594 196 aaPredicted RBP10.58□□□□□ -0.72
PNKP-228ENST00000637325 S1PR2O95136 353 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 TRBV12-3P01733 135 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 RLN1P04808 185 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 ZNF735P0CB33 412 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 DEFA4P12838 97 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 GP9P14770 177 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
PNKP-228ENST00000637325 VAX1Q5SQQ9 334 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 LPCAT3Q6P1A2 487 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 OR9G4Q8NGQ1 327 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 COMMD5Q9GZQ3 224 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 FXYD6Q9H0Q3 95 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 PLEKHA2Q9HB19 425 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 TMEM140Q9NV12 185 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 EXTL2Q9UBQ6 330 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 FBXL7Q9UJT9 491 aa10.58□□□□□ -0.72
PNKP-228ENST00000637325 E7EUB6 86 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 UPK2O00526 184 aa10.57□□□□□ -0.72
PNKP-228ENST00000637325 NHLRC4P0CG21 123 aaPredicted RBP10.57□□□□□ -0.72
PNKP-228ENST00000637325 MYOD1P15172 320 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms