RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 TRBV5-4A0A0C4DH59 114 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 A0A0G2JRQ6 117 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 FAM236AA0A1B0GUQ0 79 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 FAM236BA0A1B0GV22 79 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 IZUMO1RA6ND01 250 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 B4DEV8 164 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 OR2T1O43869 369 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 LYZL6O75951 148 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 JTBO76095 146 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 APOMO95445 188 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 TNFP01375 233 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 HLA-DOBP13765 273 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 ZNF93P35789 620 aaPredicted RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 THBS3P49746 956 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 CRYBA2P53672 197 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 AQP4P55087 323 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 FOXA3P55318 350 aaPredicted RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 NDUFV3P56181 108 aaKnown RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 KRTAP10-5P60370 271 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 TIMM10P62072 90 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 RPS11P62280 158 aaKnown RBP eCLIP2.33□□□□□ -2.04
VIM-210ENST00000637053 ERCC8Q13216 396 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 CST6Q15828 149 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 RTL8BQ17RB0 113 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 KHDC3LQ587J8 217 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 C10orf91Q5T1B1 145 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 ALKAL2Q6UX46 152 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 UNQ9165/PRO28630Q6UXU0 137 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 IZUMO2Q6UXV1 221 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 NOTCH2NLQ7Z3S9 236 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 FAM19A3Q7Z5A8 133 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 ARPINQ7Z6K5 226 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 SAXO1Q8IYX7 474 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 C6orf223Q8N319 242 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 SLC22A24Q8N4F4 322 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 LINC00337Q8N6G1 96 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 STPG4Q8N801 248 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 ZIC4Q8N9L1 334 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 ZNF114Q8NC26 417 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 OR10J6PQ8NGY7 276 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 FAM3DQ96BQ1 224 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 BORCS8Q96FH0 119 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 ERMAPQ96PL5 475 aaPredicted RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 GPX7Q96SL4 187 aaPredicted RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 THTPAQ9BU02 230 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 VAMP8Q9BV40 100 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 RTL8AQ9BWD3 113 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 MRPL20Q9BYC9 149 aaKnown RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 DPY30Q9C005 99 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 COMMD5Q9GZQ3 224 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 WDR61Q9GZS3 305 aaKnown RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 EIF5A2Q9GZV4 153 aaKnown RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 AICDAQ9GZX7 198 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 DEFB127Q9H1M4 99 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 ATG5Q9H1Y0 275 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 HEXA-AS1Q9H8Q6 139 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 OTORQ9NRC9 128 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 CA10Q9NS85 328 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 CCDC167Q9P0B6 97 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 XCL2Q9UBD3 114 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 IL36RNQ9UBH0 155 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 LINC00527Q9UJ94 153 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 FUT9Q9Y231 359 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 COQ4Q9Y3A0 265 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 MPC1Q9Y5U8 109 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 RALGAPA1Q6GYQ0 2036 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 TNS2Q63HR2 1409 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 DENND4AQ7Z401 1863 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 FYCO1Q9BQS8 1478 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 CEP164Q9UPV0 1460 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 MYH7P12883 1935 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 TRAV8-1A0A0A6YYK1 113 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 KLLNB2CW77 178 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 G3V3Q6 166 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 ISLRO14498 428 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 KLF7O75840 302 aaPredicted RBP2.32□□□□□ -2.04
VIM-210ENST00000637053 KRASP01116 189 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 TRBV12-3P01733 135 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 FRMD6-AS1P0C7T7 363 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 LINC00271P0C7V0 271 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 CECR9P0C854 216 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 SMIM10L2AP0DMW4 78 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 SMIM10L2BP0DMW5 78 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 CRYGSP22914 178 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 GATA2P23769 480 aaPredicted RBP2.32□□□□□ -2.04
VIM-210ENST00000637053 PSMB8P28062 276 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 OPRK1P41145 380 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 NUDT2P50583 147 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 ZNF83P51522 516 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 MP68P56378 58 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 RPS13P62277 151 aaKnown RBP2.32□□□□□ -2.04
VIM-210ENST00000637053 HERVK_113P63121 156 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 PLGLB1Q02325 96 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 KLRD1Q13241 179 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 HES1Q14469 280 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 TGIF1Q15583 401 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 MLF2Q15773 248 aaPredicted RBP2.32□□□□□ -2.04
VIM-210ENST00000637053 SP6Q3SY56 376 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 C11orf71Q6IPW1 123 aa2.32□□□□□ -2.04
VIM-210ENST00000637053 UFSP1Q6NVU6 142 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms