RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LEPROTL1O95214 131 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 UBE2E2Q96LR5 201 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 JOSD1Q15040 202 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 P2RY6Q15077 328 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 GPR146Q96CH1 333 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 CHCHD5Q9BSY4 110 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 OR10J3Q5JRS4 329 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 SAP25Q8TEE9 199 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 ARPC1AQ92747 370 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 IGLV3-16A0A075B6K0 115 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 B9A039 149 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 SLC25A20O43772 301 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 CD8AP01732 235 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 CFHR3Q02985 330 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 RTN4RL2Q86UN3 420 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 DRAM1Q8N682 238 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 SCGB3A1Q96QR1 104 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 C7orf77A4D0Y5 90 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 RBMY1BA6NDE4 496 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 RBMY1EA6NEQ0 496 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 RBMY1DP0C7P1 496 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 RBMY1A1P0DJD3 496 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 RBMY1CP0DJD4 496 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 NANOS3P60323 173 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 REC114Q7Z4M0 266 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 RGPD4Q7Z3J3 1758 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 CD300CQ08708 224 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 FAM110DQ8TAY7 271 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 RNF133Q8WVZ7 376 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 SCN1AP35498 2009 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 CRHP06850 196 aa15.18■□□□□ 0.02
CACNA1A-227ENST00000636549 PAPPAQ13219 1627 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 LINC00862A6NCI5 91 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 KIAA0040Q15053 153 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 OR9G1Q8NH87 305 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 CST9LQ9H4G1 147 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 COTL1Q14019 142 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 TMEM183AQ8IXX5 376 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 SFXN3Q9BWM7 321 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 LHBP01229 141 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 HS3ST3B1Q9Y662 390 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 GLI3P10071 1580 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 C1QAP02745 245 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 TRGC1P0CF51 173 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 KCNK7Q9Y2U2 307 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
CACNA1A-227ENST00000636549 PEX7O00628 323 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 JMJD8Q96S16 334 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 EDA2RQ9HAV5 297 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 GZMBP10144 247 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 MUC1P15941 1255 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 TEX45Q8NA69 505 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 ZNF703Q9H7S9 590 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 GATA4P43694 442 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 AMELYQ99218 206 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 SDF2L1Q9HCN8 221 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 MARCH11A6NNE9 402 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 TRGC2P03986 189 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 PRSS53Q2L4Q9 553 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 DMKNQ6E0U4 476 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 MARS2Q96GW9 593 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 KLRD1Q13241 179 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 TMEM167AQ8TBQ9 72 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 SELENOHQ8IZQ5 122 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 LRTM2Q8N967 370 aa15.16■□□□□ 0.02
CACNA1A-227ENST00000636549 PNRC1Q12796 327 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 BRD3OSQ6XYD6 125 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 FAM181AQ8N9Y4 354 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 ZBTB34Q8NCN2 500 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 KCNS1Q96KK3 526 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 CHAC2Q8WUX2 184 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 INS-IGF2F8WCM5 200 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 TGFBR3LH3BV60 316 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 INSP01308 110 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 GNG5P63218 68 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 ANXA2RQ3ZCQ2 193 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 ADAMTSL1Q8N6G6 1762 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 TRAV30A0A087WSZ9 112 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 NPIPB4C9JG80 1138 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 CCL3L1P16619 93 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 OR13A1Q8NGR1 328 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 A0A1W2PQM1 296 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 SAPCD1Q5SSQ6 148 aa15.15■□□□□ 0.02
CACNA1A-227ENST00000636549 HOXA6P31267 233 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 S100A7L2Q5SY68 101 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 CYB5R2Q6BCY4 276 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 IGKV1D-42A0A075B6H8 117 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 LINC00158P58513 81 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 ZNF818PQ6ZRF7 136 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 MSGN1A6NI15 193 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 POLR2AP24928 1970 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 ADARB2-AS1A8MUL3 147 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 FXYD1O00168 92 aa15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 HOXD4P09016 255 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-227ENST00000636549 EFEMP2O95967 443 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 C12orf54Q6X4T0 127 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 CXorf65A6NEN9 183 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 FAM169BQ8N8A8 192 aa15.13■□□□□ 0.01
CACNA1A-227ENST00000636549 MOSPD3O75425 235 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms