RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 IGLV2-14P01704 120 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 FXYD4P59646 89 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 MSMO1Q15800 293 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 C15orf32Q32M92 178 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 TMEM167AQ8TBQ9 72 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 SLC5A7Q9GZV3 580 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 TUBA4BQ9H853 241 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 HRASLSQ9HDD0 168 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 TRBV9A0A0B4J1U6 114 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 HMX3A6NHT5 357 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 HERV-K104P61576 105 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 RPL8P62917 257 aaKnown RBP13.67□□□□□ -0.22
PNKP-225ENST00000636214 PUSL1Q8N0Z8 303 aaKnown RBP13.67□□□□□ -0.22
PNKP-225ENST00000636214 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 DYNLRB2Q8TF09 96 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 BORCS5Q969J3 196 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 KCTD12Q96CX2 325 aaKnown RBP13.67□□□□□ -0.22
PNKP-225ENST00000636214 S100A16Q96FQ6 103 aaKnown RBP13.67□□□□□ -0.22
PNKP-225ENST00000636214 CCL28Q9NRJ3 127 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 SIGLEC8Q9NYZ4 499 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 ADAM30Q9UKF2 790 aa13.67□□□□□ -0.22
PNKP-225ENST00000636214 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.66□□□□□ -0.22
PNKP-225ENST00000636214 NPIPB5A8MRT5 1133 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 BMPR1BO00238 502 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 FCER2P06734 321 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 CSN3P07498 182 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 DEFA4P12838 97 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 ZNF45Q02386 682 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 TMEM17Q86X19 198 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 SPAG16Q8N0X2 631 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 OR5AP2Q8NGF4 316 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 OR2K2Q8NGT1 345 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 OR4A5Q8NH83 315 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 PALMDQ9NP74 551 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 SLC2A9Q9NRM0 540 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 FBXL7Q9UJT9 491 aa13.66□□□□□ -0.22
PNKP-225ENST00000636214 A8MZ25 164 aa13.65□□□□□ -0.22
PNKP-225ENST00000636214 TEX22C9J3V5 150 aa13.65□□□□□ -0.22
PNKP-225ENST00000636214 RBMXL2O75526 392 aaKnown RBP13.65□□□□□ -0.22
PNKP-225ENST00000636214 PTHLHP12272 177 aa13.65□□□□□ -0.22
PNKP-225ENST00000636214 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
PNKP-225ENST00000636214 EIF4EBP1Q13541 118 aaPredicted RBP13.65□□□□□ -0.22
PNKP-225ENST00000636214 AADACL3Q5VUY0 350 aa13.65□□□□□ -0.22
PNKP-225ENST00000636214 IL34Q6ZMJ4 242 aa13.65□□□□□ -0.22
PNKP-225ENST00000636214 GPHA2Q96T91 129 aa13.65□□□□□ -0.22
PNKP-225ENST00000636214 BET1LQ9NYM9 111 aa13.65□□□□□ -0.22
PNKP-225ENST00000636214 MEIS3P1A6NDR6 274 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 SULT1C2O00338 296 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.23
PNKP-225ENST00000636214 XRCC3O43542 346 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 GGCTO75223 188 aaKnown RBP13.64□□□□□ -0.23
PNKP-225ENST00000636214 HPRT1P00492 218 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 IL6RP08887 468 aaPredicted RBP13.64□□□□□ -0.23
PNKP-225ENST00000636214 NQO2P16083 231 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 HLA-GP17693 338 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 ERVK-16P61578 105 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 UBE2NLQ5JXB2 153 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 TMEM69Q5SWH9 247 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 Q8N1Y9 231 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 OR51H1Q8NH63 302 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 CD300LFQ8TDQ1 290 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 EEF1AKMT3Q96AZ1 226 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 EHFQ9NZC4 300 aa13.64□□□□□ -0.23
PNKP-225ENST00000636214 A0A087WXM4 84 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 PPP5D1E7EU14 171 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 ZNF735P0CB33 412 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 PSMB6P28072 239 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 ARL3P36405 182 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 TAS2R31P59538 309 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 OR4A47Q6IF82 309 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 DMBX1Q8NFW5 382 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 GIMAP1Q8WWP7 306 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 SPATA25Q9BR10 227 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 COMMD5Q9GZQ3 224 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 C19orf73Q9NVV2 129 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 SLC2A8Q9NY64 477 aa13.63□□□□□ -0.23
PNKP-225ENST00000636214 HUWE1Q7Z6Z7 4374 aaKnown RBP13.63□□□□□ -0.23
PNKP-225ENST00000636214 CYB5BO43169 146 aa13.62□□□□□ -0.23
PNKP-225ENST00000636214 LYL1P12980 280 aa13.62□□□□□ -0.23
PNKP-225ENST00000636214 AREGP15514 252 aa13.62□□□□□ -0.23
PNKP-225ENST00000636214 TAS2R46P59540 309 aa13.62□□□□□ -0.23
PNKP-225ENST00000636214 LSM3P62310 102 aaKnown RBP13.62□□□□□ -0.23
PNKP-225ENST00000636214 SAMD12Q8N8I0 201 aa13.62□□□□□ -0.23
PNKP-225ENST00000636214 TM2D3Q9BRN9 247 aa13.62□□□□□ -0.23
PNKP-225ENST00000636214 TPPPO94811 219 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 TNFAIP8O95379 198 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 IFNA6P05013 189 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 CRYGCP07315 174 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 BRWD1-AS2P59051 145 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 CD81P60033 236 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 FAM106AQ4KMX7 169 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 ZNF818PQ6ZRF7 136 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 C19orf35Q6ZS72 473 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 LAX1Q8IWV1 398 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 TSPAN14Q8NG11 270 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 OR5H2Q8NGV7 314 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 ISOC1Q96CN7 298 aa13.61□□□□□ -0.23
PNKP-225ENST00000636214 CXorf58Q96LI9 332 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms