RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 FAM212BQ9NTI7 297 aaPredicted RBP12.15□□□□□ -0.46
CLN6-211ENST00000635754 PTTG2Q9NZH5 202 aa12.15□□□□□ -0.46
CLN6-211ENST00000635754 COPZ2Q9P299 210 aa12.15□□□□□ -0.46
CLN6-211ENST00000635754 TSSC4Q9Y5U2 329 aaPredicted RBP12.15□□□□□ -0.46
CLN6-211ENST00000635754 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
CLN6-211ENST00000635754 MPPED1O15442 326 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 IGHG4P01861 327 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 CTSDP07339 412 aaPredicted RBP12.14□□□□□ -0.47
CLN6-211ENST00000635754 ELANEP08246 267 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 LPAR6P43657 344 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 SSBP2P81877 361 aaPredicted RBP12.14□□□□□ -0.47
CLN6-211ENST00000635754 FOXE3Q13461 319 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 POU2AF1Q16633 256 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 MRGPRG-AS1Q2M3A8 158 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 CXorf66Q5JRM2 361 aaPredicted RBP12.14□□□□□ -0.47
CLN6-211ENST00000635754 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 UNQ5815/PRO19632Q6UWF5 114 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 LFNGQ8NES3 379 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 DMBX1Q8NFW5 382 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 TMEM167AQ8TBQ9 72 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 R3HDM4Q96D70 268 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 HRASLSQ9HDD0 168 aa12.14□□□□□ -0.47
CLN6-211ENST00000635754 A0A1W2PN81 502 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 A0A1W2PRX2 142 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 EGR2P11161 476 aaPredicted RBP12.13□□□□□ -0.47
CLN6-211ENST00000635754 PPIFP30405 207 aaKnown RBP12.13□□□□□ -0.47
CLN6-211ENST00000635754 CHRNA7P36544 502 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 BAK1Q16611 211 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 AKIRIN2Q53H80 203 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 OR4A47Q6IF82 309 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 MINDY2Q8NBR6 621 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 PHB2Q99623 299 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
CLN6-211ENST00000635754 NUBP2Q9Y5Y2 271 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 TNCP24821 2201 aa12.13□□□□□ -0.47
CLN6-211ENST00000635754 MARCH11A6NNE9 402 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 ADARB2-AS1A8MUL3 147 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 H0Y980 276 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 TSPAN15O95858 294 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 SERPINE2P07093 398 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 PSMB8P28062 276 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 MAS1LP35410 378 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
CLN6-211ENST00000635754 ZNF585BQ52M93 769 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 TMEM65Q6PI78 240 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
CLN6-211ENST00000635754 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 SDHCQ99643 169 aaPredicted RBP12.12□□□□□ -0.47
CLN6-211ENST00000635754 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 TMEM140Q9NV12 185 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 GPR132Q9UNW8 380 aa12.12□□□□□ -0.47
CLN6-211ENST00000635754 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 KRASP01116 189 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 IGLV1-40P01703 118 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 PF4V1P10720 104 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 RPL8P62917 257 aaKnown RBP12.11□□□□□ -0.47
CLN6-211ENST00000635754 OR4F17Q8NGA8 305 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 OR5M8Q8NGP6 311 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 S100ZQ8WXG8 99 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 TMEM68Q96MH6 324 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 OR4F4Q96R69 305 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
CLN6-211ENST00000635754 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 AKIP1Q9NQ31 210 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 VWFP04275 2813 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 PKD1L1Q8TDX9 2849 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 TEX13DA0A0J9YY54 714 aaPredicted RBP12.11□□□□□ -0.47
CLN6-211ENST00000635754 MSGN1A6NI15 193 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 B3GALNT1O75752 331 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
CLN6-211ENST00000635754 RPA2P15927 270 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 CD40LGP29965 261 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 G6PCP35575 357 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 C10orf55Q5SWW7 151 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 LCNL1Q6ZST4 164 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 TP53RKQ96S44 253 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 SPIN2AQ99865 258 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 SPIN2BQ9BPZ2 258 aa12.11□□□□□ -0.47
CLN6-211ENST00000635754 NAP1L6A6NFF2 107 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 UPK2O00526 184 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 SOX15O60248 233 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 FGF2P09038 288 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 IL7P13232 177 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 HLA-GP17693 338 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
CLN6-211ENST00000635754 KLHL30-AS1Q8NEE0 82 aa12.1□□□□□ -0.47
CLN6-211ENST00000635754 CENPXA8MT69 81 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 ATG12O94817 140 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 IL6RP08887 468 aaPredicted RBP12.09□□□□□ -0.47
CLN6-211ENST00000635754 APELAP0DMC3 54 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 SLC6A1P30531 599 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 TRIM16LQ309B1 348 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 ZNF695Q8IW36 515 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 SGPP2Q8IWX5 399 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms