RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 COPZ2Q9P299 210 aa11.57□□□□□ -0.56
HSPG2-214ENST00000635682 C14orf166Q9Y224 244 aaKnown RBP11.57□□□□□ -0.56
HSPG2-214ENST00000635682 VSIG4Q9Y279 399 aa11.57□□□□□ -0.56
HSPG2-214ENST00000635682 SRRM4A7MD48 611 aaKnown RBP11.56□□□□□ -0.56
HSPG2-214ENST00000635682 KBTBD11O94819 623 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 F2RP25116 425 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 PSMB8P28062 276 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 MAS1LP35410 378 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 MYCNOSP40205 109 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 CDX1P47902 265 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-214ENST00000635682 CRIP2P52943 208 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-214ENST00000635682 UCP3P55916 312 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 TPPP2P59282 170 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 C8orf86Q6ZUL3 223 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 VKORC1L1Q8N0U8 176 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 MINDY2Q8NBR6 621 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 SRSF12Q8WXF0 261 aaKnown RBP11.56□□□□□ -0.56
HSPG2-214ENST00000635682 NXF2Q9GZY0 626 aaKnown RBP11.56□□□□□ -0.56
HSPG2-214ENST00000635682 RBM38Q9H0Z9 239 aaKnown RBP11.56□□□□□ -0.56
HSPG2-214ENST00000635682 PLEKHA2Q9HB19 425 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 COA4Q9NYJ1 87 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 COMMD9Q9P000 198 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 SCP2D1Q9UJQ7 156 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 NUBP2Q9Y5Y2 271 aa11.56□□□□□ -0.56
HSPG2-214ENST00000635682 MSGN1A6NI15 193 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 K7EIL1 84 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 GSTZ1O43708 216 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-214ENST00000635682 RAMP3O60896 148 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 SNAPC5O75971 98 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 ATG12O94817 140 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 TRGV3P03979 118 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 SERPINE2P07093 398 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 CRYGBP07316 175 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
HSPG2-214ENST00000635682 RAB9AP51151 201 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 RPL8P62917 257 aaKnown RBP11.55□□□□□ -0.56
HSPG2-214ENST00000635682 CFHR3Q02985 330 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 PJVKQ0ZLH3 352 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 EIF4EBP1Q13541 118 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-214ENST00000635682 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 TBC1D26Q86UD7 250 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 SLC25A42Q86VD7 318 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 TERB2Q8NHR7 220 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 C4orf3Q8WVX3 66 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 DPF1Q92782 380 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 UBE2E2Q96LR5 201 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 MS4A10Q96PG2 267 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 PRRT1Q99946 306 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 RSRP1Q9BUV0 290 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 GPR61Q9BZJ8 451 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 COMMD5Q9GZQ3 224 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 ZNF430Q9H8G1 570 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-214ENST00000635682 MCUBQ9NWR8 336 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 FBXO7Q9Y3I1 522 aa11.55□□□□□ -0.56
HSPG2-214ENST00000635682 NBEAL2Q6ZNJ1 2754 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 A0A0G2JLM5 398 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 C13orf42A0A1B0GVH6 325 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 H3BUA1 57 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 ARPC1BO15143 372 aaKnown RBP11.54□□□□□ -0.56
HSPG2-214ENST00000635682 S1PR2O95136 353 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 DHFRP00374 187 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 CD74P04233 296 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 PTBP1P26599 531 aaKnown RBP eCLIP11.54□□□□□ -0.562e-11■■■■□ 25.1
HSPG2-214ENST00000635682 LPAR6P43657 344 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 RPL27AP46776 148 aaKnown RBP11.54□□□□□ -0.56
HSPG2-214ENST00000635682 TOMM5Q8N4H5 51 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 RNF152Q8N8N0 203 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 OR5T1Q8NG75 326 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 SCGB3A2Q96PL1 93 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 FYTTD1Q96QD9 318 aaKnown RBP11.54□□□□□ -0.56
HSPG2-214ENST00000635682 THAP7Q9BT49 309 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-214ENST00000635682 SLC2A9Q9NRM0 540 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 BET1LQ9NYM9 111 aa11.54□□□□□ -0.56
HSPG2-214ENST00000635682 CCL24O00175 119 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 DUS4LO95620 317 aaKnown RBP11.53□□□□□ -0.56
HSPG2-214ENST00000635682 IGLV1-40P01703 118 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 APELAP0DMC3 54 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 PIGPP57054 158 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 KRTAP10-11P60412 298 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 DEFB121Q5J5C9 76 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 PUSL1Q8N0Z8 303 aaKnown RBP11.53□□□□□ -0.56
HSPG2-214ENST00000635682 Q8N402 240 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 RNASE11Q8TAA1 199 aaKnown RBP11.53□□□□□ -0.56
HSPG2-214ENST00000635682 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
HSPG2-214ENST00000635682 OR5B12Q96R08 314 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 TSC22D3Q99576 134 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 MCRIP2Q9BUT9 160 aaKnown RBP11.53□□□□□ -0.56
HSPG2-214ENST00000635682 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
HSPG2-214ENST00000635682 COL7A1Q02388 2944 aa11.52□□□□□ -0.57
HSPG2-214ENST00000635682 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-214ENST00000635682 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.57
HSPG2-214ENST00000635682 MARCH11A6NNE9 402 aa11.52□□□□□ -0.57
HSPG2-214ENST00000635682 CYB5BO43169 146 aa11.52□□□□□ -0.57
HSPG2-214ENST00000635682 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.57
HSPG2-214ENST00000635682 KRASP01116 189 aa11.52□□□□□ -0.57
HSPG2-214ENST00000635682 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
HSPG2-214ENST00000635682 EGR2P11161 476 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-214ENST00000635682 RPA2P15927 270 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms