RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CSNK2A2P19784 350 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS4Y1P22090 263 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PRTN3P24158 256 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 MYL9P24844 172 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CNTFRP26992 372 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ELK4P28324 431 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ALDH3A1P30838 453 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PYCR1P32322 319 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 GGT2P36268 569 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TAGLN2P37802 199 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PPICP45877 212 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 GALR1P47211 349 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR1E2P47887 323 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 REG1BP48304 166 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SYNJ2BPP57105 145 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 KLF3P57682 345 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RGS8P57771 180 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 FXYD6P3P58550 94 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 KRTAP12-4P60329 112 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 DSTNP60981 165 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ATP6V0D1P61421 351 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 NCALDP61601 193 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 GNG11P61952 73 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ARF6P62330 175 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SKP1P63208 163 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TNFAIP6P98066 277 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 IFITM3Q01628 133 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RPL18Q07020 188 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PMS2P3Q13401 168 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 NAB1Q13506 487 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 KRR1Q13601 381 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 DIAPH2-AS1Q14236 149 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ENDOGQ14249 297 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TRAM2Q15035 370 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RCN1Q15293 331 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8B8Q15620 311 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNHIT3Q15649 155 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF726P1Q15940 193 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF829Q3KNS6 432 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ARHGAP11BQ3KRB8 267 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SPIN4Q56A73 249 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PYDC2Q56P42 97 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 MESTQ5EB52 335 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RNASE13Q5GAN3 156 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 XKR7Q5GH72 579 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 DEFB121Q5J5C9 76 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PABPC1L2AQ5JQF8 200 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CLEC12AQ5QGZ9 265 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TIMM23BQ5SRD1 257 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 GLYATL3Q5SZD4 288 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 HHATQ5VTY9 493 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 C1orf140Q5VVS0 124 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 STUMQ69YW2 141 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PPP1R2P3Q6NXS1 205 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SMARCD3Q6STE5 483 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZYG11AQ6WRX3 759 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 Q6ZT83 130 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 MBOAT2Q6ZWT7 520 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF767PQ75MW2 155 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC35D2Q76EJ3 337 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 GRINAQ7Z429 371 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 VTCN1Q7Z7D3 282 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 NAA40Q86UY6 237 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SBSPONQ8IVN8 264 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 C10orf107Q8IVU9 208 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC8AQ8IWT6 810 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CDH26Q8IXH8 852 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 C20orf196Q8IYI0 205 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC34Q8IZ02 419 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SYCE1Q8N0S2 351 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR6V1Q8N148 313 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TCAIMQ8N3R3 496 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RIBC1Q8N443 379 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TBC1D19Q8N5T2 526 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RNF10Q8N5U6 811 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ARL6IP6Q8N6S5 226 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 LINC00469Q8N7U9 141 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZIC4Q8N9L1 334 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CDRT4Q8N9R6 151 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CYB561A3Q8NBI2 242 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC30A7Q8NEW0 376 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2Z1Q8NG97 314 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR4M1Q8NGD0 313 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8B3Q8NGG8 313 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR5D18Q8NGL1 313 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8D4Q8NGM9 314 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR10AC1Q8NH08 325 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8K3Q8NH51 312 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RXFP4Q8TDU9 374 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CCL17Q92583 94 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PEX13Q92968 403 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 RBPMSQ93062 196 aaKnown RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 CPNE4Q96A23 557 aaPredicted RBP0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TAMM41Q96BW9 452 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC45Q96CN5 670 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TVP23CQ96ET8 276 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 TPD52L3Q96J77 140 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 PRRC1Q96M27 445 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 Q96M85 177 aa0.54□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF75AQ96N20 296 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms