RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ADA2Q9NZK5 511 aa1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 CCDC59Q9P031 241 aaKnown RBP1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 CD300AQ9UGN4 299 aa1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 SIGLEC9Q9Y336 463 aa1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 NOP16Q9Y3C1 178 aaKnown RBP1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 GOLT1BQ9Y3E0 138 aa1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 ENPP4Q9Y6X5 453 aa1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 KIF25-AS1Q9Y6Z4 181 aa1.7□□□□□ -2.14
SMARCB1-208ENST00000634926 DNAH17Q9UFH2 4485 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 IGHV3OR15-7A0A075B7D8 119 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 A0A0B4J2A0 478 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 DHRS12A0PJE2 317 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 TMEM210A6NLX4 147 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF878C9JN71 531 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 H0YHG0 523 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 TEX46H3BTG2 121 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 PEX7O00628 323 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 MRASO14807 208 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 XRCC2O43543 280 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF737O75373 536 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CCNB2O95067 398 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CST4P01036 141 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 TFF1P04155 84 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CRYBA1P05813 215 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 SERPINE2P07093 398 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CD28P10747 220 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ZBTB25P24278 435 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 PAX6P26367 422 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CRABP1P29762 137 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 RPS27P42677 84 aaKnown RBP1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 LYZP61626 148 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ARF6P62330 175 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ACTA2P62736 377 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ACTG2P63267 376 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ACTC1P68032 377 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ACTA1P68133 377 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 PRB3Q04118 309 aaPredicted RBP1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CLINT1Q14677 625 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR8G1Q15617 311 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 LRRC75BQ2VPJ9 315 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 LRRC10Q5BKY1 277 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 TMEM42Q69YG0 159 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 SMARCD3Q6STE5 483 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 MRPL21Q7Z2W9 205 aaKnown RBP1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ARPINQ7Z6K5 226 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 PDZD9Q8IXQ8 264 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CMTM1Q8IZ96 169 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 TMEM61Q8N0U2 210 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 JAGN1Q8N5M9 183 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 C8orf31Q8N9H6 132 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 SPERTQ8NA61 448 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 C20orf203Q8NBC4 194 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CYB561A3Q8NBI2 242 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR1M1Q8NGA1 313 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR11H6Q8NGC7 330 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR5L1Q8NGL2 311 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR4C13Q8NGP0 309 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR9G4Q8NGQ1 327 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR11L1Q8NGX0 322 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR10R2Q8NGX6 335 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 LYPD6BQ8NI32 183 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF502Q8TBZ5 544 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 LRRC29Q8WV35 223 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 RNF133Q8WVZ7 376 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR5P3Q8WZ94 311 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 DCUN1D4Q92564 292 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 RORBQ92753 470 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ATP6V1G3Q96LB4 118 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OPALINQ96PE5 141 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 NMNAT3Q96T66 252 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 AMELYQ99218 206 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 CCL13Q99616 98 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 RASL11BQ9BPW5 248 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 PAIP2Q9BPZ3 127 aaKnown RBP1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR51I2Q9H344 312 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR52D1Q9H346 318 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 METTL8Q9H825 291 aaKnown RBP1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 C19orf12Q9NSK7 152 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 TMEM100Q9NV29 134 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 NKIRAS1Q9NYS0 192 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 IL20Q9NYY1 176 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 SHPKQ9UHJ6 478 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 TP53TG3Q9ULZ0 132 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 KIAA1109Q2LD37 5005 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 ABCA13Q86UQ4 5058 aa1.69□□□□□ -2.14
SMARCB1-208ENST00000634926 OR2AT4A6NND4 320 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 LYRM9A8MSI8 78 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 C17orf98A8MV24 154 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 F5H5K5 113 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 CXCR6O00574 342 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 XKRYO14609 159 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 CDIPTO14735 213 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 AIREO43918 545 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 NOS1APO75052 506 aaPredicted RBP1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 SERPINA1P01009 418 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 IFNA14P01570 189 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 IGLV1-47P01700 117 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 UBCP0CG48 685 aaKnown RBP1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 PGA5P0DJD9 388 aa1.68□□□□□ -2.14
SMARCB1-208ENST00000634926 IGHV1-8P0DP01 117 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms