RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 FOXA2Q9Y261 457 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPB-209ENST00000634889 VWFP04275 2813 aa11.55□□□□□ -0.56
CDC42BPB-209ENST00000634889 A0A1W2PN81 502 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 A0A1W2PRX2 142 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 FGF2P09038 288 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 MAS1LP35410 378 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 FAUP35544 74 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 CHRNA7P36544 502 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 TNXAQ16473 311 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 TMEM65Q6PI78 240 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 TOMM5Q8N4H5 51 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 LFNGQ8NES3 379 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 MYOZ3Q8TDC0 251 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 SRRQ9GZT4 340 aa11.54□□□□□ -0.56
CDC42BPB-209ENST00000634889 MPPED1O15442 326 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 S1PR2O95136 353 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 RPLP1P05386 114 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 CDX1P47902 265 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 PIGPP57054 158 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 ERVK-16P61578 105 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 KLF9Q13886 244 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 LINC00299Q6ZSB3 139 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 CADM3Q8N126 398 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 GDPD1Q8N9F7 314 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 CCDC71LQ8N9Z2 235 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 OR51S1Q8NGJ8 323 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 OR13C8Q8NGS7 320 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 MARCH1Q8TCQ1 289 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 SRSF12Q8WXF0 261 aaKnown RBP11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 MRGPRFQ96AM1 343 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 R3HDM4Q96D70 268 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 BATF3Q9NR55 127 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 SCP2D1Q9UJQ7 156 aa11.53□□□□□ -0.56
CDC42BPB-209ENST00000634889 MARCH11A6NNE9 402 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 H3BUA1 57 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 PLXNB1O43157 2135 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 SOX15O60248 233 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 PF4V1P10720 104 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 CD40LGP29965 261 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 ZNF45Q02386 682 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 ZNF585BQ52M93 769 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 DMBX1Q8NFW5 382 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 FAM110DQ8TAY7 271 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 PHB2Q99623 299 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 SPIN2AQ99865 258 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 SPIN2BQ9BPZ2 258 aa11.52□□□□□ -0.57
CDC42BPB-209ENST00000634889 TRRAPQ9Y4A5 3859 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 H0Y980 276 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 B3GALNT1O75752 331 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 IL6RP08887 468 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 RPA2P15927 270 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 PI3P19957 117 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 LPAR6P43657 344 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 RAB9AP51151 201 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 RPL8P62917 257 aaKnown RBP11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 ZNF695Q8IW36 515 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 C4orf3Q8WVX3 66 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 UBE2E2Q96LR5 201 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 SLA2Q9H6Q3 261 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 HRASLSQ9HDD0 168 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 MCUBQ9NWR8 336 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 COPZ2Q9P299 210 aa11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 C14orf166Q9Y224 244 aaKnown RBP11.51□□□□□ -0.57
CDC42BPB-209ENST00000634889 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 MSGN1A6NI15 193 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 NUDT19A8MXV4 375 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 BRI3O95415 125 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 SERPINE2P07093 398 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 HLA-GP17693 338 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 CNPY1Q3B7I2 92 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 SCGB3A2Q96PL1 93 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 KLK15Q9H2R5 256 aa11.5□□□□□ -0.57
CDC42BPB-209ENST00000634889 FBN3Q75N90 2809 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 UPK2O00526 184 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 KRASP01116 189 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 PF4P02776 101 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 G6PCP35575 357 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 INPP1P49441 399 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 KIAA0141Q14154 515 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 C10orf55Q5SWW7 151 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 TRIQKQ629K1 86 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 C8orf86Q6ZUL3 223 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 ZNF491Q8N8L2 437 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 TP53RKQ96S44 253 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 RTBDNQ9BSG5 229 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 C5orf66Q9H5L9 145 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 VSIG4Q9Y279 399 aa11.49□□□□□ -0.57
CDC42BPB-209ENST00000634889 OR9G9P0C7N8 305 aa11.48□□□□□ -0.57
CDC42BPB-209ENST00000634889 RUNX1Q01196 453 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms