RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 MARCH11A6NNE9 402 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 MPTX1A8MV57 137 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 UPK2O00526 184 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 TSPAN9O75954 239 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 KRASP01116 189 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 HLA-AP01891 365 aaKnown RBP6.58□□□□□ -1.36
MECP2-220ENST00000631210 HLA-DRB1P01911 266 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 NQO2P16083 231 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 VAMP1P23763 118 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 S100GP29377 79 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 PRSS8Q16651 343 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 AARDQ4LEZ3 155 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 C19orf54Q5BKX5 351 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 TMEM268Q5VZI3 342 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 LIN54Q6MZP7 749 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 RBMS3Q6XE24 437 aaKnown RBP6.58□□□□□ -1.36
MECP2-220ENST00000631210 Q6ZSV7 163 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 SSX9Q7RTT3 188 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 ZNF431Q8TF32 576 aaPredicted RBP6.58□□□□□ -1.36
MECP2-220ENST00000631210 CASTOR1Q8WTX7 329 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 RBPMSQ93062 196 aaKnown RBP6.58□□□□□ -1.36
MECP2-220ENST00000631210 GPR146Q96CH1 333 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 ZNF430Q9H8G1 570 aaPredicted RBP6.58□□□□□ -1.36
MECP2-220ENST00000631210 TMEM140Q9NV12 185 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 SHPKQ9UHJ6 478 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 KCNIP3Q9Y2W7 256 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
MECP2-220ENST00000631210 NCBP2LA6PVI3 153 aaKnown RBP6.57□□□□□ -1.36
MECP2-220ENST00000631210 SNRPGP15A8MWD9 76 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 PITX3O75364 302 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 ADAP1O75689 374 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 KBTBD11O94819 623 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 OR2A4O95047 310 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 CA2P00918 260 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 HRASP01112 189 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 IGHG2P01859 326 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 SERPINE2P07093 398 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 CX3CL1P78423 397 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 TATDN3Q17R31 274 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 TRIM16LQ309B1 348 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 TMEM95Q3KNT9 176 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 C4orf46Q504U0 113 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 C10orf55Q5SWW7 151 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 ASPHD1Q5U4P2 390 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 PPP1R27Q86WC6 154 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 LGI3Q8N145 548 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 WIPF2Q8TF74 440 aaPredicted RBP6.57□□□□□ -1.36
MECP2-220ENST00000631210 LSM10Q969L4 123 aaKnown RBP6.57□□□□□ -1.36
MECP2-220ENST00000631210 WDR89Q96FK6 387 aaPredicted RBP6.57□□□□□ -1.36
MECP2-220ENST00000631210 OR2A7Q96R45 310 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 C16orf95Q9H693 158 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 SERTAD4Q9NUC0 356 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 TMEM14BQ9NUH8 114 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 NSG2Q9Y328 171 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 MMP24Q9Y5R2 645 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 ALG5Q9Y673 324 aa6.57□□□□□ -1.36
MECP2-220ENST00000631210 BTBD17A6NE02 478 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 M0QZK8 103 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 PRAF2O60831 178 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 FGF2P09038 288 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 HLA-GP17693 338 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 VDAC1P21796 283 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 CRIP2P52943 208 aaPredicted RBP6.56□□□□□ -1.36
MECP2-220ENST00000631210 RPL15P61313 204 aaKnown RBP6.56□□□□□ -1.36
MECP2-220ENST00000631210 IL15RAQ13261 267 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 KRTAP24-1Q3LI83 254 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 VMA21Q3ZAQ7 101 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 GGNBP1Q5YKI7 109 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 ZNF562Q6V9R5 426 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 Q6ZNX1 250 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
MECP2-220ENST00000631210 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.56□□□□□ -1.36
MECP2-220ENST00000631210 OR4A5Q8NH83 315 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 JMJD8Q96S16 334 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 CLCC1Q96S66 551 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 WNT10AQ9GZT5 417 aa6.56□□□□□ -1.36
MECP2-220ENST00000631210 RANBP3Q9H6Z4 567 aaPredicted RBP6.56□□□□□ -1.36
MECP2-220ENST00000631210 TEX50A0A1B0GTY4 177 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 DUXBA0A1W2PPF3 345 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 C15orf61A6NNL5 157 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 TEX22C9J3V5 150 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 TRIM77I1YAP6 450 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 CCSO14618 274 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 ATP6V0E1O15342 81 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 NDUFA7O95182 113 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 DHFRP00374 187 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 IGF1P05019 195 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 HOXB5P09067 269 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 ANXA3P12429 323 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 COMPP49747 757 aaPredicted RBP6.55□□□□□ -1.36
MECP2-220ENST00000631210 OR2B8PP59922 312 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 RPL8P62917 257 aaKnown RBP6.55□□□□□ -1.36
MECP2-220ENST00000631210 SRPXP78539 464 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 CFHR3Q02985 330 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 CBX3Q13185 183 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 C11orf87Q6NUJ2 197 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 ZNF429Q86V71 674 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 ZNF695Q8IW36 515 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 FAM219AQ8IW50 185 aa6.55□□□□□ -1.36
MECP2-220ENST00000631210 FOXRED2Q8IWF2 684 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms