RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 OR6F1Q8NGZ6 308 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 VSTM2AQ8TAG5 236 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 TINAGL1Q9GZM7 467 aaPredicted RBP10.96□□□□□ -0.65
PNKP-223ENST00000629179 FXYD6Q9H0Q3 95 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 MIXL1Q9H2W2 232 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 SCOCQ9UIL1 159 aa10.96□□□□□ -0.65
PNKP-223ENST00000629179 ANKRD34BA5PLL1 514 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 E7EUB6 86 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 CTDSP2O14595 271 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 OVOL1O14753 267 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 RBFOX2O43251 390 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■■■■□ 23.3
PNKP-223ENST00000629179 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
PNKP-223ENST00000629179 PGLYRP1O75594 196 aaPredicted RBP10.95□□□□□ -0.66
PNKP-223ENST00000629179 PRH1P02810 166 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 IL6RP08887 468 aaPredicted RBP10.95□□□□□ -0.66
PNKP-223ENST00000629179 MYOD1P15172 320 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 RCVRNP35243 200 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
PNKP-223ENST00000629179 DEFB121Q5J5C9 76 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 OR52I2Q8NH67 350 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 RAB2BQ8WUD1 216 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 ABHD1Q96SE0 405 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 SPIN2AQ99865 258 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 SPIN2BQ9BPZ2 258 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 KLK11Q9UBX7 282 aa10.95□□□□□ -0.66
PNKP-223ENST00000629179 A0A0G2JLM5 398 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 A0A1B0GW64 132 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 M0QYG6 137 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 RGS5O15539 181 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 S1PR2O95136 353 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 BRI3O95415 125 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 HPRT1P00492 218 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 RLN1P04808 185 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 RPA2P15927 270 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 MAS1LP35410 378 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 RPL27AP46776 148 aaKnown RBP10.94□□□□□ -0.66
PNKP-223ENST00000629179 TMBIM6P55061 237 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 DGCR2P98153 550 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 OR4A47Q6IF82 309 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 TTC9CQ8N5M4 171 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 BORCS5Q969J3 196 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 FYTTD1Q96QD9 318 aaKnown RBP10.94□□□□□ -0.66
PNKP-223ENST00000629179 HRASLSQ9HDD0 168 aa10.94□□□□□ -0.66
PNKP-223ENST00000629179 TRAV3A0A0B4J244 114 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 TEX22C9J3V5 150 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 GPR31O00270 319 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 NQO2P16083 231 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 ECI1P42126 302 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 TAS2R31P59538 309 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 RPL8P62917 257 aaKnown RBP10.93□□□□□ -0.66
PNKP-223ENST00000629179 ZNF45Q02386 682 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 PHLDA2Q53GA4 152 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 LAX1Q8IWV1 398 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 DYNC2LI1Q8TCX1 351 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 CD300LFQ8TDQ1 290 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 AIFM2Q9BRQ8 373 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 PLEKHA2Q9HB19 425 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 BET1LQ9NYM9 111 aa10.93□□□□□ -0.66
PNKP-223ENST00000629179 UPK2O00526 184 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 TRBV12-3P01733 135 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 ZNF735P0CB33 412 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 HLA-GP17693 338 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 F2RP25116 425 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 LPAR6P43657 344 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 RHOGP84095 191 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 POU2AF1Q16633 256 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 ZNF343Q6P1L6 599 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 C19orf35Q6ZS72 473 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 CMTM1Q8IZ96 169 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 DMBX1Q8NFW5 382 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 OR4A5Q8NH83 315 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 DGCR14Q96DF8 476 aaKnown RBP10.92□□□□□ -0.66
PNKP-223ENST00000629179 USMG5Q96IX5 58 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 PRR25Q96S07 402 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 BCL7BQ9BQE9 202 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 RANGRFQ9HD47 186 aaPredicted RBP10.92□□□□□ -0.66
PNKP-223ENST00000629179 AKIP1Q9NQ31 210 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 SLC2A9Q9NRM0 540 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 ZMAT5Q9UDW3 170 aaKnown RBP10.92□□□□□ -0.66
PNKP-223ENST00000629179 MTFP1Q9UDX5 166 aa10.92□□□□□ -0.66
PNKP-223ENST00000629179 TRBV9A0A0B4J1U6 114 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 CGB1A6NKQ9 187 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 H3BMQ9 156 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 SAP30O75446 220 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 TPPPO94811 219 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 CD3DP04234 171 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 AREGP15514 252 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 INSL3P51460 131 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 ZNF585BQ52M93 769 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 VAX1Q5SQQ9 334 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 LPCAT3Q6P1A2 487 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 ACSM6Q6P461 480 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 SLC25A42Q86VD7 318 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 FCAMRQ8WWV6 532 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 ISOC1Q96CN7 298 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 RSRP1Q9BUV0 290 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 TMEM140Q9NV12 185 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 COMMD9Q9P000 198 aa10.91□□□□□ -0.66
PNKP-223ENST00000629179 CCDC59Q9P031 241 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms