RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 ERMAPQ96PL5 475 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 OR2A7Q96R45 310 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 RARRES2Q99969 163 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 RTBDNQ9BSG5 229 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ADAT1Q9BUB4 502 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 PAXXQ9BUH6 204 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM147Q9BVK8 224 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 C1QTNF6Q9BXI9 259 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 PBOV1Q9GZY1 135 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 OR51E2Q9H255 320 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 RERGLQ9H628 205 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 TUBA4BQ9H853 241 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 CXorf21Q9HAI6 301 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM9BQ9NQ34 198 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF331Q9NQX6 463 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 KCNIP2Q9NS61 270 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ASF1BQ9NVP2 202 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ANAPC11Q9NYG5 84 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 TAS2R8Q9NYW2 309 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 WRAP73Q9P2S5 460 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 SLC2A6Q9UGQ3 507 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 PCYOX1Q9UHG3 505 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 TRMT112Q9UI30 125 aaKnown RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 VAX2Q9UIW0 290 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF256Q9Y2P7 627 aaPredicted RBP2.2□□□□□ -2.06
CNOT1-223ENST00000628857 MED31Q9Y3C7 131 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ABCC3O15438 1527 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 KMT2EQ8IZD2 1858 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ERVK-7P63135 1459 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 ARAP2Q8WZ64 1704 aa2.2□□□□□ -2.06
CNOT1-223ENST00000628857 HECW2Q9P2P5 1572 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 REREQ9P2R6 1566 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 PTPRFP10586 1907 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 TECPR2O15040 1411 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 PRG4Q92954 1404 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 FANCMQ8IYD8 2048 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 NUP205Q92621 2012 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 DOCK6Q96HP0 2047 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 LRRC7Q96NW7 1537 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 DUOX2Q9NRD8 1548 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 TRAV9-2A0A087WT02 112 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 TRAV8-4A0A0B4J246 113 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 TRAV26-2A0A0B4J265 109 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 DHRS12A0PJE2 317 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 A6NDN8 102 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 COLCA2A8K830 154 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF705GA8MUZ8 300 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 FAM220BPB1ANY3 271 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 FNDC10F2Z333 226 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 F6UB75 175 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 G3V3Q6 166 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 M0R233 179 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 CDC42EP2O14613 210 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 CDX4O14627 284 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 NPFFO15130 113 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 NUDT14O95848 222 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 PTHP01270 115 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 GIG44P09565 113 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 LINC00694P0DN24 101 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 GZMBP10144 247 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 FGF6P10767 208 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SPNP16150 400 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF140P52738 457 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 AQP4P55087 323 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 MTPNP58546 118 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SNRPD2P62316 118 aaKnown RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 BTG2P78543 158 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 CRADDP78560 199 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SLC38A11Q08AI6 406 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 LAMTOR4Q0VGL1 99 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ARFRP1Q13795 201 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 HES1Q14469 280 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 PDGFRLQ15198 375 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 OR7A5Q15622 319 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF726P1Q15940 193 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 KHDC3LQ587J8 217 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM255AQ5JRV8 349 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 MEIG1Q5JSS6 88 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SCGB1D4Q6XE38 83 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SLC22A18ASQ8N1D0 253 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 HIST3H2BBQ8N257 126 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 DEFB125Q8N687 156 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ANKRD29Q8N6D5 301 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF525Q8N782 197 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 PLPP5Q8NEB5 264 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 OR52R1Q8NGF1 315 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 C15orf40Q8WUR7 153 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SRSF12Q8WXF0 261 aaKnown RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 FGF11Q92914 225 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 CIB3Q96Q77 187 aaPredicted RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 PLEKHF1Q96S99 279 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 VAMP8Q9BV40 100 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SFXN3Q9BWM7 321 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 GGTLC1Q9BX51 225 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 TM2D1Q9BX74 207 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 SPANXDQ9BXN6 97 aa2.19□□□□□ -2.06
CNOT1-223ENST00000628857 POLR2J3Q9H1A7 115 aaKnown RBP2.19□□□□□ -2.06
CNOT1-223ENST00000628857 ATG5Q9H1Y0 275 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms