RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 TMEM176BQ3YBM2 270 aaPredicted RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 C6orf99Q4VX62 202 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 TSPO2Q5TGU0 170 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 KHDRBS2Q5VWX1 349 aaKnown RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 TMEM236Q5W0B7 351 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 NANOGP8Q6NSW7 305 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CEMP1Q6PRD7 247 aaPredicted RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CLEC19AQ6UXS0 136 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 BRD3OSQ6XYD6 125 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 MARCH3Q86UD3 253 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 C10orf107Q8IVU9 208 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 C1orf174Q8IYL3 243 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 PGAM4Q8N0Y7 254 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 TMEM256Q8N2U0 113 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CCNYL1Q8N7R7 359 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 OR52E4Q8NGH9 312 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 OR5W2Q8NH69 310 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 ZNF420Q8TAQ5 688 aaPredicted RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 FAM45AQ8TCE6 357 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 DTD1Q8TEA8 209 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 ORAOV1Q8WV07 137 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 BLNKQ8WV28 456 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 FAM104AQ969W3 186 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 SMIM8Q96KF7 97 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 FAM19A4Q96LR4 140 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 C20orf144Q9BQM9 153 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 MS4A8Q9BY19 250 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 FBXO6Q9NRD1 293 aaPredicted RBP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 TMEM100Q9NV29 134 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 TAS2R13Q9NYV9 303 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 OR5V1Q9UGF6 321 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 CYB5R1Q9UHQ9 305 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 SNX24Q9Y343 169 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.89□□□□□ -2.11
SCN8A-210ENST00000627665 SMAD5-AS1Q9Y6J3 95 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 DNAH7Q8WXX0 4024 aa1.89□□□□□ -2.11
SCN8A-210ENST00000627665 IGLV3-32A0A0A0MS00 114 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 IGHV1-69-2A0A0G2JMI3 117 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 A0A0U1RQV1 116 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 TMEM223A0PJW6 202 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 CD300LBA8K4G0 201 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 C9JQL5 133 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 C11orf94C9JXX5 98 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 TRAPPC2LH3BP13 241 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 GPR171O14626 319 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 PHYHO14832 338 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 FADS1O60427 444 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 CCDC22O60826 627 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 MED6O75586 246 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 AHSA1O95433 338 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 HLA-DQA1P01909 254 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 OR12D1P0DN82 309 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 AKR1C4P17516 323 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 ELK1P19419 428 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 PAX6P26367 422 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 SERPINB1P30740 379 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 RCVRNP35243 200 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 TGFBR2P37173 567 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 MAGEA2P43356 314 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 CBX5P45973 191 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 MARCKSL1P49006 195 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 BLVRAP53004 296 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 TAS2R31P59538 309 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 MAGOHP61326 146 aaKnown RBP1.88□□□□□ -2.11
SCN8A-210ENST00000627665 CCL8P80075 99 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 SARNPP82979 210 aaKnown RBP1.88□□□□□ -2.11
SCN8A-210ENST00000627665 FOXF1Q12946 379 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 CEACAM21Q3KPI0 293 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 TRMT12Q53H54 448 aaKnown RBP1.88□□□□□ -2.11
SCN8A-210ENST00000627665 TTMPQ5BVD1 217 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 UBE2NLQ5JXB2 153 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 CLEC12AQ5QGZ9 265 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 LAMTOR1Q6IAA8 161 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 FAM45BPQ6NSW5 357 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 MED27Q6P2C8 311 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 LRRN1Q6UXK5 716 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 CASP12Q6UXS9 341 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 SLC16A13Q7RTY0 426 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 NDUFA11Q86Y39 141 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 WFDC9Q8NEX5 89 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 SLC26A10Q8NG04 563 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 OR6N1Q8NGY5 312 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 OR1L1Q8NH94 360 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 DYNC2LI1Q8TCX1 351 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 GHSRQ92847 366 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 DDIT4LQ96D03 193 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 MRAP2Q96G30 205 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 NARS2Q96I59 477 aaKnown RBP1.88□□□□□ -2.11
SCN8A-210ENST00000627665 KCNS1Q96KK3 526 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 ZNF488Q96MN9 340 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 RBBP8Q99708 897 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 ZNF426Q9BUY5 554 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 EFCAB11Q9BUY7 163 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 KIFC1Q9BW19 673 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 OR52D1Q9H346 318 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 PSG11Q9UQ72 335 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 ASB4Q9Y574 426 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 STARD9Q9P2P6 4700 aa1.88□□□□□ -2.11
SCN8A-210ENST00000627665 IGLV4-69A0A075B6H9 119 aa1.87□□□□□ -2.11
SCN8A-210ENST00000627665 IGHV7-4-1A0A0J9YVY3 117 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms