RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 C12orf77C9JDV5 145 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 ADIPOQQ15848 244 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 Q5BKY6 102 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 SCN4AP35499 1836 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 ZNF708P17019 499 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 FHITP49789 147 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 PRSS8Q16651 343 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 GPR82Q96P67 336 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 LOC102724200A0A096LPH7 203 aaPredicted RBP10.86□□□□□ -0.67
SCN8A-209ENST00000627620 SPATA45Q537H7 98 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 FAM201AQ5SY85 155 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 AHCTF1Q8WYP5 2266 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 TMEM238LA0A1B0GVL6 79 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 A6NJY4 79 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 TDRD6O60522 2096 aaKnown RBP10.86□□□□□ -0.67
SCN8A-209ENST00000627620 NPIPB9F8W1W9 429 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 RRHO14718 337 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 UQCRFS1P47985 274 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 LINC00305Q7Z4B0 112 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 VWCEQ96DN2 955 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 PARLQ9H300 379 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 CASP8AP2Q9UKL3 1982 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 SMAD7O15105 426 aaKnown RBP10.86□□□□□ -0.67
SCN8A-209ENST00000627620 GCHFRP30047 84 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 SRIP30626 198 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 LTBRP36941 435 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 DLX6P56179 175 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 ATP5IP56385 69 aaPredicted RBP10.86□□□□□ -0.67
SCN8A-209ENST00000627620 SNRPD3P62318 126 aaKnown RBP10.86□□□□□ -0.67
SCN8A-209ENST00000627620 FAM74A4Q5TZK3 123 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 MBNL2Q5VZF2 373 aaKnown RBP10.86□□□□□ -0.67
SCN8A-209ENST00000627620 GATAD1Q8WUU5 269 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 ABHD17AQ96GS6 310 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 FBLL1A6NHQ2 334 aaKnown RBP10.86□□□□□ -0.67
SCN8A-209ENST00000627620 CEP290O15078 2479 aa10.86□□□□□ -0.67
SCN8A-209ENST00000627620 IGLV3-19P01714 112 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 TRGV3P03979 118 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 LCN2P80188 198 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 BSPH1Q075Z2 132 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 ABLIM2Q6H8Q1 611 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 C2orf68Q2NKX9 166 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 C1QTNF12Q5T7M4 302 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 FAM216BQ8N7L0 139 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 HIST1H1AQ02539 215 aaPredicted RBP10.85□□□□□ -0.67
SCN8A-209ENST00000627620 TCF24Q7RTU0 167 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 SSBP3Q9BWW4 388 aaPredicted RBP10.85□□□□□ -0.67
SCN8A-209ENST00000627620 IGHV2OR16-5A0A0B4J2B6 119 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 ZNF98A6NK75 572 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 FOXI3A8MTJ6 420 aaPredicted RBP10.85□□□□□ -0.67
SCN8A-209ENST00000627620 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 IGHV3-23P01764 117 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 COX6CP09669 75 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 CEACAM1P13688 526 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 PMCHL1Q16048 86 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 CYP2G1PQ6ZSU1 146 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 C1orf162Q8NEQ5 155 aaPredicted RBP10.85□□□□□ -0.67
SCN8A-209ENST00000627620 TM2D1Q9BX74 207 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 SHISA3A0PJX4 238 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 SIAH2O43255 324 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 TNFSF10P50591 281 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 ZNF56Q15929 161 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 COL5A1-AS1Q5SY13 56 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 FAM57AQ8TBR7 257 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 KLK15Q9H2R5 256 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 FBXL15Q9H469 300 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
SCN8A-209ENST00000627620 IL6RP08887 468 aaPredicted RBP10.84□□□□□ -0.67
SCN8A-209ENST00000627620 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 FADS6Q8N9I5 356 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 OSR1Q8TAX0 266 aaPredicted RBP10.84□□□□□ -0.67
SCN8A-209ENST00000627620 AICDAQ9GZX7 198 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 ERVH48-1M5A8F1 160 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 IMMP1LQ96LU5 166 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 PSMG3Q9BT73 122 aaPredicted RBP10.84□□□□□ -0.67
SCN8A-209ENST00000627620 C1QTNF5Q9BXJ0 243 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 GPR61Q9BZJ8 451 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 MOB4Q9Y3A3 225 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 CCDC88CQ9P219 2028 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 PF4P02776 101 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 ARL6IP6Q8N6S5 226 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 CXorf65A6NEN9 183 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 TM4SF5O14894 197 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 IGHV1-2P23083 117 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 OTX1P32242 354 aaPredicted RBP10.84□□□□□ -0.67
SCN8A-209ENST00000627620 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
SCN8A-209ENST00000627620 NRN1LQ496H8 165 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 FAM159AQ6UWV7 190 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 SFRP2Q96HF1 295 aa10.84□□□□□ -0.67
SCN8A-209ENST00000627620 ZNF256Q9Y2P7 627 aaPredicted RBP10.84□□□□□ -0.67
SCN8A-209ENST00000627620 RGPD3A6NKT7 1758 aaPredicted RBP10.84□□□□□ -0.67
SCN8A-209ENST00000627620 PROB1E7EW31 1015 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms