RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 AMMECR1Q9Y4X0 333 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 U3KQ87 197 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 FAM90A26D6RGX4 464 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 RBMXL2O75526 392 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 HKR1P10072 659 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 RRASP10301 218 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 MMP9P14780 707 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 COX7A1P24310 79 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 PAX9P55771 341 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 LCN2P80188 198 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 HCP5Q6MZN7 132 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 C1orf122Q6ZSJ8 110 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 ZNF767PQ75MW2 155 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 TGIF2LXQ8IUE1 241 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 C1orf159Q96HA4 380 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 SIRT7Q9NRC8 400 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 ANK2Q01484 3957 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.68□□□□□ -1.184e-6■□□□□ 9.7
PDLIM5-223ENST00000627587 FAM90A9PA6NNJ1 464 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 H7C2Y5 167 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 CHST1O43916 411 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 FOXH1O75593 365 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 HRASP01112 189 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 IFNA7P01567 189 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 IGKV1-16P04430 117 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 PRTN3P24158 256 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 REG1BP48304 166 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 ARHGDIBP52566 201 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 GPR157Q5UAW9 335 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 C12orf54Q6X4T0 127 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 IL17RELQ6ZVW7 336 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 SSX9Q7RTT3 188 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 VKORC1L1Q8N0U8 176 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 PNKDQ8N490 385 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 BSCL2Q96G97 398 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 RAB40CQ96S21 281 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 PCGF1Q9BSM1 259 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 ZNF471Q9BX82 626 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 CYTL1Q9NRR1 136 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 KPTNQ9Y664 436 aa7.68□□□□□ -1.18
PDLIM5-223ENST00000627587 CUBNO60494 3623 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 IGHV2-70DA0A0C4DH43 119 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 H0YJW9 148 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 BUB1B-PAK6H3BSN5 160 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 SYNGR2O43760 224 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 GPR137BO60478 399 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 MED6O75586 246 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 OR9G9P0C7N8 305 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 RAB13P51153 203 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 CAV2P51636 162 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 DVL1P1P54792 670 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 UBA52P62987 128 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 TNFRSF9Q07011 255 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 OR2C3Q8N628 320 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 TEX29Q8N6K0 151 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 ZNF680Q8NEM1 530 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 OR5AN1Q8NGI8 311 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 OR4P4Q8NGL7 312 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 RHOVQ96L33 236 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 NABP2Q9BQ15 211 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 AIFM2Q9BRQ8 373 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 MMP26Q9NRE1 261 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 LYRM2Q9NU23 88 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 TMEM140Q9NV12 185 aa7.67□□□□□ -1.18
PDLIM5-223ENST00000627587 TRAV3A0A0B4J244 114 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 SRRM4A7MD48 611 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 LY6LH3BQJ8 138 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 TAAR5O14804 337 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 SHOXO15266 292 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 TXNL1O43396 289 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 SPDEFO95238 335 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 IL6RP08887 468 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 MC5RP33032 325 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 UBE2KP61086 200 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 RPL23AP62750 156 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 EXOSC2Q13868 293 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 POU2AF1Q16633 256 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 AARDQ4LEZ3 155 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 PDPNQ86YL7 162 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 OR11H6Q8NGC7 330 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 OR4A16Q8NH70 328 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 OSR1Q8TAX0 266 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 RPEQ96AT9 228 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 SLC25A31Q9H0C2 315 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 UNKLQ9H9P5 680 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 HSPB7Q9UBY9 170 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 CACFD1Q9UGQ2 172 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 WSB1Q9Y6I7 421 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 IGSF23A1L1A6 192 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 FAM157AC9JC47 383 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 GAPDHP04406 335 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 ARG1P05089 322 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 KLRD1Q13241 179 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 VMO1Q7Z5L0 202 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 OR4C13Q8NGP0 309 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 ST8SIA2Q92186 375 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 LHX4Q969G2 390 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 FLYWCH2Q96CP2 140 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms