RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MYOZ3Q8TDC0 251 aa10.96□□□□□ -0.65
SNRPA1-216ENST00000626000 SCGB3A2Q96PL1 93 aa10.96□□□□□ -0.65
SNRPA1-216ENST00000626000 PHB2Q99623 299 aa10.96□□□□□ -0.65
SNRPA1-216ENST00000626000 MCRIP2Q9BUT9 160 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-216ENST00000626000 TPSG1Q9NRR2 321 aa10.96□□□□□ -0.65
SNRPA1-216ENST00000626000 VSIG4Q9Y279 399 aa10.96□□□□□ -0.65
SNRPA1-216ENST00000626000 PKD1L1Q8TDX9 2849 aa10.96□□□□□ -0.66
SNRPA1-216ENST00000626000 A0A0G2JLM5 398 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 M0QYG6 137 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 MPPED1O15442 326 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 RPLP1P05386 114 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 PGAM2P15259 253 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 RPA2P15927 270 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 CD33P20138 364 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 RAB9AP51151 201 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 RUNX1Q01196 453 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 FAM209BQ5JX69 171 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 LHFPL1Q86WI0 220 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 PUSL1Q8N0Z8 303 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 DMBX1Q8NFW5 382 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 SRSF12Q8WXF0 261 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 SOSTQ9BQB4 213 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 SRSF8Q9BRL6 282 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 TINAGL1Q9GZM7 467 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 SLC2A9Q9NRM0 540 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 SCP2D1Q9UJQ7 156 aa10.95□□□□□ -0.66
SNRPA1-216ENST00000626000 PIGBOS1A0A0B4J2F0 54 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 ANKRD20A5PA0PJZ0 165 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 DHFRP00374 187 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 EGR2P11161 476 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 ETV6P41212 452 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 WFDC9Q8NEX5 89 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 RBMXL1Q96E39 390 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 RCC1LQ96I51 464 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 TSC22D3Q99576 134 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 HRASLSQ9HDD0 168 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 SLC2A8Q9NY64 477 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 ZMAT5Q9UDW3 170 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 FBXO7Q9Y3I1 522 aa10.94□□□□□ -0.66
SNRPA1-216ENST00000626000 PLXNB1O43157 2135 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 MARCH11A6NNE9 402 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 CYB5BO43169 146 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 RAMP3O60896 148 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 OR9G9P0C7N8 305 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 HLA-GP17693 338 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 PJVKQ0ZLH3 352 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 SCGB2B2Q4G0G5 96 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 PHLDA2Q53GA4 152 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 PYDC2Q56P42 97 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 OR4A47Q6IF82 309 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 IDO2Q6ZQW0 420 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 MRPL41Q8IXM3 137 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 ZNF491Q8N8L2 437 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 THAP7Q9BT49 309 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 FKBP11Q9NYL4 201 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 COPZ2Q9P299 210 aa10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 C14orf166Q9Y224 244 aaKnown RBP10.93□□□□□ -0.66
SNRPA1-216ENST00000626000 VWFP04275 2813 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 DPPA5A6NC42 116 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 MSGN1A6NI15 193 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 H0Y980 276 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 CCL24O00175 119 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 SNAPC5O75971 98 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 SERPINE2P07093 398 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 CTSDP07339 412 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 OR8U8P0C7N1 319 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 PIGPP57054 158 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 BRWD1-AS2P59051 145 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 TPPP2P59282 170 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 LINC00299Q6ZSB3 139 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 C8orf86Q6ZUL3 223 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 TBC1D26Q86UD7 250 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 CCDC190Q86UF4 302 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 Q8N402 240 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 DPF1Q92782 380 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 USMG5Q96IX5 58 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 ZNF355PQ9NSJ1 428 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 TMEM140Q9NV12 185 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 TRRAPQ9Y4A5 3859 aa10.92□□□□□ -0.66
SNRPA1-216ENST00000626000 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 FAM223BA6NKX1 122 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 S1PR2O95136 353 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 TRGV3P03979 118 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 LPAR6P43657 344 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 PPP5CP53041 499 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 SSX9Q7RTT3 188 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 VKORC1L1Q8N0U8 176 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 LINC00482Q8N8I6 264 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 GDPD1Q8N9F7 314 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 OR4C16Q8NGL9 310 aa10.91□□□□□ -0.66
SNRPA1-216ENST00000626000 GPHA2Q96T91 129 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms