RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 DMRTA1Q5VZB9 504 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 OR2C3Q8N628 320 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 A0A1B0GWB2 263 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 GPR183P32249 361 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 OVOL2Q9BRP0 275 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 MRPL32Q9BYC8 188 aaKnown RBP5.39□□□□□ -1.55
CDKL5-205ENST00000623535 PKIBQ9C010 78 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 PQLC2Q6ZP29 291 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 CHST5Q9GZS9 411 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 ITGB4P16144 1822 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 SCN8AQ9UQD0 1980 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 FOXI3A8MTJ6 420 aaPredicted RBP5.39□□□□□ -1.55
CDKL5-205ENST00000623535 SPINK4O60575 86 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 FCN2Q15485 313 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 HLA-DRB5Q30154 266 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 ALKAL2Q6UX46 152 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 THAP8Q8NA92 274 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 PARD6AQ9NPB6 346 aa5.39□□□□□ -1.55
CDKL5-205ENST00000623535 TRAV1-2A0A0B4J238 106 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 NDUFB8O95169 186 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 TRAV21A0A0B4J279 112 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 FAM90A2PQ658T7 463 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 B3GNT8Q7Z7M8 397 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 FAM90A1Q86YD7 464 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 TMEM190Q8WZ59 177 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 PRDM13Q9H4Q3 707 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 ST6GALNAC2Q9UJ37 374 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 KLK13Q9UKR3 277 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 NHSQ6T4R5 1651 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 CLDN34H7C241 214 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 RPS11P62280 158 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDKL5-205ENST00000623535 FUT5Q11128 374 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 ECM29Q5VYK3 1845 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 TMEM272A0A1B0GTI8 110 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 CISD3P0C7P0 127 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 TTRP02766 147 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 RUNX1Q01196 453 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 OR11H1Q8NG94 326 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 OR5A1Q8NGJ0 315 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 OR11H2Q8NH07 326 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 SP7Q8TDD2 431 aaPredicted RBP5.38□□□□□ -1.55
CDKL5-205ENST00000623535 TM2D2Q9BX73 214 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 MBNL3Q9NUK0 354 aaKnown RBP5.38□□□□□ -1.55
CDKL5-205ENST00000623535 NBR2O15453 112 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 HOXB3P14651 431 aaPredicted RBP5.38□□□□□ -1.55
CDKL5-205ENST00000623535 PAQR4Q8N4S7 273 aaPredicted RBP5.38□□□□□ -1.55
CDKL5-205ENST00000623535 OOSP1A8MZH6 123 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 RPL36A-HNRNPH2H7BZ11 118 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 PATE4P0C8F1 98 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 ERVS71-1P61550 626 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 PMS2P11Q13670 270 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 LBHQ53QV2 105 aaPredicted RBP5.38□□□□□ -1.55
CDKL5-205ENST00000623535 VCX2Q9H322 139 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 OPRL1P41146 370 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 ZNF696Q9H7X3 374 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 PILRAQ9UKJ1 303 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 FAM27BQ5VT28 67 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.38□□□□□ -1.55
CDKL5-205ENST00000623535 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 CCDC168Q8NDH2 2452 aa5.38□□□□□ -1.55
CDKL5-205ENST00000623535 DIRC3C9JPN6 131 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 PEX7O00628 323 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 CLLU1Q5K131 121 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 KLF14Q8TD94 323 aaPredicted RBP5.37□□□□□ -1.55
CDKL5-205ENST00000623535 H3BMM0 161 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 MINOS1Q5TGZ0 78 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 LDLRAD3Q86YD5 345 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 KIR2DL5BQ8NHK3 375 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 UBE2WQ96B02 151 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 RHOVQ96L33 236 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 LINC00470Q9BZP3 86 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 MINOS1-NBL1R4GNA1 71 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 TSKUQ8WUA8 353 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 ST6GALNAC6Q969X2 333 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 RNF167Q9H6Y7 350 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 TRBV20OR9-2A0A075B6H5 130 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 IGHV3-11P01762 117 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 PI3P19957 117 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 C9orf66Q5T8R8 295 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 PGLYRP3Q96LB9 341 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 TRAV5A0A0B4J249 113 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 B4DEV8 164 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 LRRC75AQ8NAA5 344 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 NRG4Q8WWG1 115 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 RNF183Q96D59 192 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 DNAJC4Q9NNZ3 241 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 KIAA2026Q5HYC2 2103 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 CD74P04233 296 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 TMEM255AQ5JRV8 349 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 BCDIN3DQ7Z5W3 292 aaKnown RBP5.37□□□□□ -1.55
CDKL5-205ENST00000623535 DMRTC2Q8IXT2 367 aaPredicted RBP5.37□□□□□ -1.55
CDKL5-205ENST00000623535 M0R381 172 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 KLF12Q9Y4X4 402 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 FAM74A7A6NL05 159 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 PSMG4Q5JS54 123 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 MBNL2Q5VZF2 373 aaKnown RBP5.37□□□□□ -1.55
CDKL5-205ENST00000623535 DPPA3Q6W0C5 159 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 NHP2Q9NX24 153 aaKnown RBP5.37□□□□□ -1.55
CDKL5-205ENST00000623535 OR9G9P0C7N8 305 aa5.37□□□□□ -1.55
CDKL5-205ENST00000623535 OR11H7Q8NGC8 314 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms