RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 FAM222BQ8WU58 562 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ZNF385AQ96PM9 386 aaKnown RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 LOXL2Q9Y4K0 774 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 TNS1Q9HBL0 1735 aaKnown RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 UMODP07911 640 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 RAB9AP51151 201 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 LINC00114Q6XXX2 140 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ZNF664Q8N3J9 261 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 OR4D5Q8NGN0 318 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 SLC25A40Q8TBP6 338 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 SRSF12Q8WXF0 261 aaKnown RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 MRPL16Q9NX20 251 aaKnown RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 SCO2A0A1W2PP80 73 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 FOXL1Q12952 345 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ACTL10Q5JWF8 245 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 WFDC8Q8IUA0 241 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 OR51G1Q8NGK1 321 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 UCN2Q96RP3 112 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 TRAV17A0A0B4J275 112 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 MGST3O14880 152 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 EGR1P18146 543 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 DGAT2L7PQ6IED9 249 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 RNASEH2CQ8TDP1 164 aaKnown RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 FAM131CQ96AQ9 280 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 LPAR2Q9HBW0 351 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 OSTCQ9NRP0 149 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 LTBP4Q8N2S1 1624 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 IGHV3-13P01766 116 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 IGHV3-7P01780 117 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 IL6RP08887 468 aaPredicted RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 LGALS3P17931 250 aaKnown RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 INO80CQ6PI98 192 aaPredicted RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 C10orf126Q8N4M7 172 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 AGMATQ9BSE5 352 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 CHRNA10Q9GZZ6 450 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 FNDC4Q9H6D8 234 aaPredicted RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 RNF7Q9UBF6 113 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 MT-CO3P00414 261 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 CEACAM1P13688 526 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 CHCHD1Q96BP2 118 aaKnown RBP7.62□□□□□ -1.19
VCL-206ENST00000623461 FZR1Q9UM11 496 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ZDBF2Q9HCK1 2354 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ADAMTSL1Q8N6G6 1762 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ATP5LO75964 103 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 GAGE1Q13065 139 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 OR2K2Q8NGT1 345 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 RND1Q92730 232 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 ST6GALNAC6Q969X2 333 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 ANAPC13Q9BS18 74 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 PRDM14Q9GZV8 571 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 TRIOBPQ9H2D6 2365 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 OR11H12B2RN74 326 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 MST1P26927 711 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 PSG9Q00887 426 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 MAJINQ3KP22 176 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 FAM19A2Q8N3H0 131 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 OR11H1Q8NG94 326 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 OR11H2Q8NH07 326 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 PLPPR1Q8TBJ4 325 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 ZNF714Q96N38 554 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 WDR90Q96KV7 1748 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 PGPEP1LA6NFU8 196 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 C3orf80F5H4A9 247 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 LYL1P12980 280 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 PRDX2P32119 198 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 Q6AWC8 147 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 SPEM1Q8N4L4 309 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 DIRC2Q96SL1 478 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 NEU1Q99519 415 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 WFDC1Q9HC57 220 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 KLK10O43240 276 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 ATP5G3P48201 142 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 CCL20P78556 96 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 WDR54Q9H977 334 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 SIPA1L1O43166 1804 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 ADCYAP1P18509 176 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 TMEM30BQ3MIR4 351 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 TUSC5Q8IXB3 177 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 DRAM1Q8N682 238 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 ZNF488Q96MN9 340 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 ONECUT1Q9UBC0 465 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 FAM186AA6NE01 2351 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 APOHP02749 345 aaPredicted RBP7.61□□□□□ -1.19
VCL-206ENST00000623461 GZMBP10144 247 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 COX5BP10606 129 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 GFI1Q99684 422 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 WNT5BQ9H1J7 359 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 TCF19Q9Y242 345 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 TSPAN13O95857 204 aa7.61□□□□□ -1.19
VCL-206ENST00000623461 SSBP4Q9BWG4 385 aaPredicted RBP7.61□□□□□ -1.19
VCL-206ENST00000623461 ZNF83P51522 516 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 EGR4Q05215 589 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 ST6GALNAC3Q8NDV1 305 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 SSBP3Q9BWW4 388 aaPredicted RBP7.6□□□□□ -1.19
VCL-206ENST00000623461 CLEC5AQ9NY25 188 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 JPT1Q9UK76 154 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 HSD52Q0P140 79 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 TNFSF15O95150 251 aa7.6□□□□□ -1.19
VCL-206ENST00000623461 MC5RP33032 325 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms