RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 RCHY1Q96PM5 261 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 RTL8AQ9BWD3 113 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 GGTLC1Q9BX51 225 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 V9GYV3 84 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 SAA2-SAA4A0A096LPE2 208 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 IGHV3-64DA0A0J9YX35 117 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 LINC00473A8K010 186 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 C9JCJ5 164 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 PMCHP20382 165 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 GCHFRP30047 84 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 CEBPDP49716 269 aaPredicted RBP11.74□□□□□ -0.53
LDB3-209ENST00000623056 ZNF146Q15072 292 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 DCAF12Q5T6F0 453 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 OR2Y1Q8NGV0 311 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 ORAOV1Q8WV07 137 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 EAF1Q96JC9 268 aaPredicted RBP11.74□□□□□ -0.53
LDB3-209ENST00000623056 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 CACNA1EQ15878 2313 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 A0A1W2PS18 150 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 PSPNO60542 156 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 RBX1P62877 108 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 KIAA1644Q3SXP7 199 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 OR10J3Q5JRS4 329 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 C11orf52Q96A22 123 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 MS4A5Q9H3V2 200 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 POLDIP2Q9Y2S7 368 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
LDB3-209ENST00000623056 TMEM30CPA0ZSE6 113 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 SPINK4O60575 86 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 MT-CO3P00414 261 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 HBZP02008 142 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 OR9G9P0C7N8 305 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 ZNF83P51522 516 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 CLDN18P56856 261 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 IL11RAQ14626 422 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 SPATA31B1PQ5VZV4 182 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 UBALD2Q8IYN6 164 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 NINJ1Q92982 152 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 KMT2EQ8IZD2 1858 aa11.73□□□□□ -0.53
LDB3-209ENST00000623056 TRAV34A0A0B4J273 112 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 CDIPTO14735 213 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 COL8A2P25067 703 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 LEMD1Q68G75 181 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 TCTEX1D1Q8N7M0 179 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 CACNA1DQ01668 2161 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 NKX6-3A6NJ46 265 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 HAND1O96004 215 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 MT-ND6P03923 174 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 C3orf79P0CE67 100 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 LYSMD4Q5XG99 296 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 SSMEM1Q8WWF3 244 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 APH1AQ96BI3 265 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 UHRF2Q96PU4 802 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 WNT10AQ9GZT5 417 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 TUBG2Q9NRH3 451 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 DOCK7Q96N67 2140 aa11.72□□□□□ -0.53
LDB3-209ENST00000623056 OOEPA6NGQ2 149 aa11.71□□□□□ -0.53
LDB3-209ENST00000623056 PRSS46E5RG02 174 aa11.71□□□□□ -0.53
LDB3-209ENST00000623056 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.53
LDB3-209ENST00000623056 CX3CL1P78423 397 aa11.71□□□□□ -0.53
LDB3-209ENST00000623056 Q0VFX4 171 aa11.71□□□□□ -0.53
LDB3-209ENST00000623056 WDR73Q6P4I2 378 aa11.71□□□□□ -0.53
LDB3-209ENST00000623056 NIT1Q86X76 327 aa11.71□□□□□ -0.53
LDB3-209ENST00000623056 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
LDB3-209ENST00000623056 DPRXA6NFQ7 191 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 FOXH1O75593 365 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 FOLR3P41439 243 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 PRRX1P54821 245 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 KLF3P57682 345 aaPredicted RBP11.71□□□□□ -0.54
LDB3-209ENST00000623056 RPP30P78346 268 aaKnown RBP11.71□□□□□ -0.54
LDB3-209ENST00000623056 AESQ08117 197 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 EFNB3Q15768 340 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 Q6ZVH6 145 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 WDR31Q8NA23 367 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 C22orf15Q8WYQ4 148 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.54
LDB3-209ENST00000623056 HEYLQ9NQ87 328 aaPredicted RBP11.71□□□□□ -0.54
LDB3-209ENST00000623056 CCL4P13236 92 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 SLC35B1P78383 322 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 HSD17B10Q99714 261 aaKnown RBP11.7□□□□□ -0.54
LDB3-209ENST00000623056 IGHV3-43A0A0B4J1X8 118 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 TOMM40O96008 361 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 IGHV3-43DP0DP04 118 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 SRIP30626 198 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 HINT1P49773 126 aaPredicted RBP11.7□□□□□ -0.54
LDB3-209ENST00000623056 TMPRSS3P57727 454 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 RPL19P84098 196 aaKnown RBP11.7□□□□□ -0.54
LDB3-209ENST00000623056 OR1C1Q15619 314 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 CENPWQ5EE01 88 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
LDB3-209ENST00000623056 MRGPRDQ8TDS7 321 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms