RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 KBTBD11O94819 623 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 NDUFB8O95169 186 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 IGHV3-23P01764 117 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 CTXN2P0C2S0 81 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 RAB3BP20337 219 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 MYL9P24844 172 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 CDNFQ49AH0 187 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 CLEC19AQ6UXS0 136 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 TMEM61Q8N0U2 210 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 TMEM167AQ8TBQ9 72 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 CCDC140Q96MF4 163 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 FANCD2OSQ96PS1 177 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 FYTTD1Q96QD9 318 aaKnown RBP17.84■□□□□ 0.45
CPSF1-214ENST00000622776 OR2A7Q96R45 310 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 SLC2A9Q9NRM0 540 aa17.84■□□□□ 0.45
CPSF1-214ENST00000622776 IGKV1D-13A0A0B4J2D9 117 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 A0A1B0GW64 132 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 IGLV2-14P01704 120 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 IGKV1-13P0DP09 117 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 ARL3P36405 182 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 ZNF57Q68EA5 555 aaPredicted RBP17.83■□□□□ 0.44
CPSF1-214ENST00000622776 PUSL1Q8N0Z8 303 aaKnown RBP17.83■□□□□ 0.44
CPSF1-214ENST00000622776 OR4S2Q8NH73 311 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 VSTM2AQ8TAG5 236 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 S4R3C0 116 aa17.83■□□□□ 0.44
CPSF1-214ENST00000622776 TMEM213A2RRL7 107 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 CRYGCP07315 174 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 ZNF735P0CB33 412 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 MAS1LP35410 378 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 FAM106AQ4KMX7 169 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 ZNF367Q7RTV3 350 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 TCTEX1D2Q8WW35 142 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 NRG4Q8WWG1 115 aa17.82■□□□□ 0.44
CPSF1-214ENST00000622776 HSD17B10Q99714 261 aaKnown RBP17.82■□□□□ 0.44
CPSF1-214ENST00000622776 ZNF320A2RRD8 509 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 AREGP15514 252 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 TBCEQ15813 527 aaPredicted RBP17.81■□□□□ 0.44
CPSF1-214ENST00000622776 HACD4Q5VWC8 232 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 NR2C2APQ86WQ0 139 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 UXS1Q8NBZ7 420 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 OR52B4Q8NGK2 314 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 GGTLC1Q9BX51 225 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 DCSTAMPQ9H295 470 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 MLXQ9UH92 298 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 SPATA2Q9UM82 520 aa17.81■□□□□ 0.44
CPSF1-214ENST00000622776 TRDV1A0A1B0GX56 115 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 A8MWP6 167 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 DHFRP00374 187 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 PSMB6P28072 239 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 BRWD1-AS2P59051 145 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 EIF4EBP1Q13541 118 aaPredicted RBP17.8■□□□□ 0.44
CPSF1-214ENST00000622776 KLK9Q2XQG4 91 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 CNIH2Q6PI25 160 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 EEF1AKMT3Q96AZ1 226 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 OVOL2Q9BRP0 275 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 NDUFB11Q9NX14 153 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 KLK9Q9UKQ9 250 aa17.8■□□□□ 0.44
CPSF1-214ENST00000622776 CTRB1P17538 263 aa17.79■□□□□ 0.44
CPSF1-214ENST00000622776 CTRB2Q6GPI1 263 aa17.79■□□□□ 0.44
CPSF1-214ENST00000622776 MFSD4AQ8N468 514 aa17.79■□□□□ 0.44
CPSF1-214ENST00000622776 NUDCD2Q8WVJ2 157 aa17.79■□□□□ 0.44
CPSF1-214ENST00000622776 TAS2R8Q9NYW2 309 aa17.79■□□□□ 0.44
CPSF1-214ENST00000622776 ANKRD65E5RJM6 399 aa17.78■□□□□ 0.44
CPSF1-214ENST00000622776 SCAF4O95104 1147 aaKnown RBP17.78■□□□□ 0.44
CPSF1-214ENST00000622776 HIST1H1BP16401 226 aaKnown RBP17.78■□□□□ 0.44
CPSF1-214ENST00000622776 RPL8P62917 257 aaKnown RBP17.78■□□□□ 0.44
CPSF1-214ENST00000622776 ANKRD55Q3KP44 614 aa17.78■□□□□ 0.44
CPSF1-214ENST00000622776 C22orf42Q6IC83 251 aa17.78■□□□□ 0.44
CPSF1-214ENST00000622776 OR4A47Q6IF82 309 aa17.78■□□□□ 0.44
CPSF1-214ENST00000622776 SSX9Q7RTT3 188 aa17.78■□□□□ 0.44
CPSF1-214ENST00000622776 LOC102724200A0A096LPH7 203 aaPredicted RBP17.77■□□□□ 0.44
CPSF1-214ENST00000622776 SMIM30A4D0T7 59 aa17.77■□□□□ 0.44
CPSF1-214ENST00000622776 HRASP01112 189 aa17.77■□□□□ 0.44
CPSF1-214ENST00000622776 MYOD1P15172 320 aa17.77■□□□□ 0.44
CPSF1-214ENST00000622776 BTNL8Q6UX41 500 aa17.77■□□□□ 0.44
CPSF1-214ENST00000622776 ZNF66Q6ZN08 573 aa17.77■□□□□ 0.44
CPSF1-214ENST00000622776 LINC00476Q8WZB0 136 aa17.77■□□□□ 0.44
CPSF1-214ENST00000622776 TMEM235A6NFC5 223 aa17.76■□□□□ 0.43
CPSF1-214ENST00000622776 REG1AP05451 166 aa17.76■□□□□ 0.43
CPSF1-214ENST00000622776 CLEC3BP05452 202 aa17.76■□□□□ 0.43
CPSF1-214ENST00000622776 DEFA4P12838 97 aa17.76■□□□□ 0.43
CPSF1-214ENST00000622776 TM4SF20Q53R12 229 aa17.76■□□□□ 0.43
CPSF1-214ENST00000622776 GPHA2Q96T91 129 aa17.76■□□□□ 0.43
CPSF1-214ENST00000622776 ANXA10Q9UJ72 324 aa17.76■□□□□ 0.43
CPSF1-214ENST00000622776 IGLV11-55A0A075B6I3 123 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 TRBV7-1A0A0A6YYK4 115 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 MFSD2BA6NFX1 497 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 CGB1A6NKQ9 187 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 SSX5O60225 188 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 HLA-GP17693 338 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 GALP22466 123 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 GNG2P59768 71 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 UNQ9165/PRO28630Q6UXU0 137 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 CXorf58Q96LI9 332 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 BET1LQ9NYM9 111 aa17.75■□□□□ 0.43
CPSF1-214ENST00000622776 TRAV25A0A0B4J276 109 aa17.74■□□□□ 0.43
CPSF1-214ENST00000622776 NOTOA8MTQ0 251 aa17.74■□□□□ 0.43
CPSF1-214ENST00000622776 C8orf88P0DMB2 117 aa17.74■□□□□ 0.43
CPSF1-214ENST00000622776 MARC2Q969Z3 335 aa17.74■□□□□ 0.43
CPSF1-214ENST00000622776 CXorf65A6NEN9 183 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms