RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CLDN18P56856 261 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 WDR31Q8NA23 367 aa13.65□□□□□ -0.22
GABRB3-215ENST00000622697 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
GABRB3-215ENST00000622697 RPLP1P05386 114 aaKnown RBP13.64□□□□□ -0.23
GABRB3-215ENST00000622697 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-215ENST00000622697 PPOXP50336 477 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 WFDC3Q8IUB2 231 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 ZIC4Q8N9L1 334 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 PSMG3Q9BT73 122 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-215ENST00000622697 C1RLQ9NZP8 487 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 CD55P08174 381 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 ACSF3Q4G176 576 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-215ENST00000622697 SFRP2Q96HF1 295 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 LOC102724200A0A096LPH7 203 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-215ENST00000622697 CBLN1P23435 193 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 TMEM97Q5BJF2 176 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 GRAMD2BQ96HH9 432 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 FBLN5Q9UBX5 448 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 ESPL1Q14674 2120 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 PTPRDP23468 1912 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 ZNF716A6NP11 495 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 MOSP00540 346 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 C8orf88P0DMB2 117 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 CCL20P78556 96 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 GTF2H5Q6ZYL4 71 aa13.64□□□□□ -0.23
GABRB3-215ENST00000622697 TRPM7Q96QT4 1865 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 LOC102723996A0A087X1L8 192 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 GCHFRP30047 84 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 MC5RP33032 325 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 FAM216BQ8N7L0 139 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 SRIP30626 198 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 ARF6P62330 175 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 TSC2P49815 1807 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 SLC17A3O00476 420 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 DDTP30046 118 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 PAFAH1B2P68402 229 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 CLDND2Q8NHS1 167 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 SPSB4Q96A44 273 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 IL6RP08887 468 aaPredicted RBP13.63□□□□□ -0.23
GABRB3-215ENST00000622697 ATP5G3P48201 142 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 RPL30P62888 115 aaKnown RBP13.63□□□□□ -0.23
GABRB3-215ENST00000622697 PCSK4Q6UW60 755 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 THSD7BQ9C0I4 1608 aa13.63□□□□□ -0.23
GABRB3-215ENST00000622697 IGLV3-32A0A0A0MS00 114 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 IGHV3-35A0A0C4DH35 117 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 C9orf172C9J069 976 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 F8VVB4 439 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 F8VWA3 439 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 CORTO00230 105 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 SCGB1C2P0DMR2 95 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 SUPT4H1P63272 117 aaKnown RBP13.62□□□□□ -0.23
GABRB3-215ENST00000622697 C19orf35Q6ZS72 473 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 ATOH7Q8N100 152 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 IGKV1-27A0A075B6S5 117 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 A8MWL6 223 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 RAMP3O60896 148 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 FCGR2BP31994 310 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-215ENST00000622697 GPR6P46095 362 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-215ENST00000622697 FHL1Q13642 323 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 DIRC2Q96SL1 478 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 ZNF581Q9P0T4 197 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 TMEM56-RWDD3S4R434 201 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 MMD2Q8IY49 270 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 MGPP08493 103 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 GATA2P23769 480 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-215ENST00000622697 ERVFRD-1P60508 538 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 EIF4E3Q8N5X7 224 aaKnown RBP13.62□□□□□ -0.23
GABRB3-215ENST00000622697 ZNF525Q8N782 197 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 CGAP01215 116 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 IGFBP2P18065 325 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 HOXA4Q00056 320 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-215ENST00000622697 PRB3Q04118 309 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-215ENST00000622697 TWIST1Q15672 202 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 WDYHV1Q96HA8 205 aa13.62□□□□□ -0.23
GABRB3-215ENST00000622697 TRAV24A0A0B4J272 114 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 ATXN7O15265 892 aaPredicted RBP13.61□□□□□ -0.23
GABRB3-215ENST00000622697 SPATA45Q537H7 98 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 CENPWQ5EE01 88 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 TMEM105Q8N8V8 129 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 TXNDC17Q9BRA2 123 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 CBLN4Q9NTU7 201 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 RFNGQ9Y644 331 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 RELBQ01201 579 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 TMEM177Q53S58 311 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 IMMP2LQ96T52 175 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 GCGP01275 180 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 SELENOTP62341 195 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 NEU1Q99519 415 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
GABRB3-215ENST00000622697 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 LDLRAD4O15165 306 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 NABP1Q96AH0 204 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 SCO2A0A1W2PP80 73 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
GABRB3-215ENST00000622697 C9orf106Q8NAJ2 232 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 S4R3C0 116 aa13.61□□□□□ -0.23
GABRB3-215ENST00000622697 PHF3Q92576 2039 aaKnown RBP13.6□□□□□ -0.23
GABRB3-215ENST00000622697 IGHV2OR16-5A0A0B4J2B6 119 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 PLAURQ03405 335 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms