RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 DEDDO75618 318 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 SCGB1D2O95969 90 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 S100A10P60903 97 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 SSX2Q16385 188 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 GPR157Q5UAW9 335 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 ZNF546Q86UE3 836 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 MAPK1IP1LQ8NDC0 245 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 VSTM2AQ8TAG5 236 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 MS4A7Q9GZW8 240 aaPredicted RBP11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 SLC25A32Q9H2D1 315 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 TMEM140Q9NV12 185 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 MBD2Q9UBB5 411 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 HILPDAQ9Y5L2 63 aa11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 PRRC2AP48634 2157 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-212ENST00000622493 FXYD6-FXYD2A0A087WZ82 144 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 A0A1W2PRD5 423 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 A0A1W2PRF3 423 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 A0A1W2PRM7 423 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 K7EPK0 472 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 IL6RP08887 468 aaPredicted RBP11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 SAA4P35542 130 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 RPS16P62249 146 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 IZUMO4Q1ZYL8 232 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 AARDQ4LEZ3 155 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 CYB5R2Q6BCY4 276 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 OR4A47Q6IF82 309 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 SSX9Q7RTT3 188 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 VKORC1L1Q8N0U8 176 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 FAM71E2Q8N5Q1 922 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 ARL6Q9H0F7 186 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 BET1LQ9NYM9 111 aa11.46□□□□□ -0.57
CLTCL1-212ENST00000622493 TRAV40A0A0B4J280 105 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 H0YIZ8 118 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 TIMM23O14925 209 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 BPIFB3P59826 476 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 CXorf66Q5JRM2 361 aaPredicted RBP11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 ALKAL2Q6UX46 152 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 ZNF429Q86V71 674 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 FOXRED2Q8IWF2 684 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 PUSL1Q8N0Z8 303 aaKnown RBP11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 OR4A16Q8NH70 328 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 OR4A5Q8NH83 315 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 CFHR4Q92496 578 aa11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.58
CLTCL1-212ENST00000622493 IGHV3-72A0A0B4J1Y9 119 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 E5RGE8 158 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 WRBO00258 174 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 RBMXL2O75526 392 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 PVALBP20472 110 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 UBE2KP61086 200 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 RELBQ01201 579 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 VMA21Q3ZAQ7 101 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 PIP4P2Q8N4L2 257 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 INO80EQ8NBZ0 244 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 AJUBAQ96IF1 538 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 OR5AC2Q9NZP5 309 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 TNFSF18Q9UNG2 199 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 NSG2Q9Y328 171 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 PDZD2O15018 2839 aa11.45□□□□□ -0.58
CLTCL1-212ENST00000622493 ARPC5O15511 151 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 MED6O75586 246 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 VENTXO95231 258 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 IGLV2-23P01705 113 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 SAA1P0DJI8 122 aaPredicted RBP11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 UBA52P62987 128 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 TNFRSF9Q07011 255 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 ZNF345Q14585 488 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 STPG2Q8N412 459 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 TSNAXQ99598 290 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 MFFQ9GZY8 342 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 FKBP11Q9NYL4 201 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 PRNDQ9UKY0 176 aa11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 RCL1Q9Y2P8 373 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-212ENST00000622493 C15orf61A6NNL5 157 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 UPK2O00526 184 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 SYNGR2O43760 224 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 LY86O95711 162 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 BRS3P32247 399 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 CTAG1AP78358 180 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 PDLIM3Q53GG5 364 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 DYNAPQ8N1N2 210 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 RAB40CQ96S21 281 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 TMEM14BQ9NUH8 114 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 HECTD1Q9ULT8 2610 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 A0A0D9SG52 128 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 CHST1O43916 411 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 KBTBD11O94819 623 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 OR2F2O95006 317 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 SPDEFO95238 335 aa11.43□□□□□ -0.58
CLTCL1-212ENST00000622493 MOSP00540 346 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms