RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 FAM210BQ96KR6 192 aa14.42□□□□□ -0.1
FAM3A-222ENST00000621967 DCTN5Q9BTE1 182 aa14.42□□□□□ -0.1
FAM3A-222ENST00000621967 NPCDR1Q9BY65 106 aa14.42□□□□□ -0.1
FAM3A-222ENST00000621967 SLC25A22Q9H936 323 aa14.42□□□□□ -0.1
FAM3A-222ENST00000621967 TRBV24-1A0A075B6N3 115 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 FAM90A9PA6NNJ1 464 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 YIF1AO95070 293 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 EGR1P18146 543 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 CFHR2P36980 270 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 LINC00205P59089 165 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 CR1LQ2VPA4 569 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 OR10G9Q8NGN4 311 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 OR10G7Q8NGN6 311 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 OR51M1Q9H341 326 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 IGKV1D-17A0A075B6S4 117 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 DEFB108AA8MXU0 73 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 PROP1O75360 226 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 KBTBD11O94819 623 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 OPN1MWP04001 364 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 CD3EP07766 207 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 OPN1MW2P0DN77 364 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 OPN1MW3P0DN78 364 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 DUTP33316 252 aaKnown RBP14.41□□□□□ -0.1
FAM3A-222ENST00000621967 NDUFA6P56556 154 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 FFAR4Q5NUL3 377 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 NCR3LG1Q68D85 454 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 R3HDM4Q96D70 268 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 MANBALQ9NQG1 85 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 JPT1Q9UK76 154 aa14.41□□□□□ -0.1
FAM3A-222ENST00000621967 CADP27708 2225 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 C15orf62A8K5M9 175 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 LY86O95711 162 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 TRGC2P03986 189 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 GZMHP20718 246 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 PSMB3P49720 205 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 MSMPQ1L6U9 139 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 Q8N7P7 452 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 DIRC2Q96SL1 478 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 SSX3Q99909 188 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 SMIM7Q9BQ49 75 aa14.4□□□□□ -0.1
FAM3A-222ENST00000621967 ACTR3CQ9C0K3 210 aaPredicted RBP14.4□□□□□ -0.1
FAM3A-222ENST00000621967 GCN1Q92616 2671 aaKnown RBP14.4□□□□□ -0.1
FAM3A-222ENST00000621967 PHOX2AO14813 284 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 OR9G9P0C7N8 305 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 MORN2Q502X0 79 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 SPNS3Q6ZMD2 512 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 OR2Z1Q8NG97 314 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 SPOCK3Q9BQ16 436 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 QTRT1Q9BXR0 403 aaKnown RBP14.39□□□□□ -0.11
FAM3A-222ENST00000621967 MGST3O14880 152 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 YPEL1O60688 119 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 HPRT1P00492 218 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 GPR12P47775 334 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 EDDM3AQ14507 147 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 HNF4GQ14541 408 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 TMEM241Q24JQ0 296 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 SNX22Q96L94 193 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 YPEL2Q96QA6 119 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 OR6C3Q9NZP0 311 aa14.39□□□□□ -0.11
FAM3A-222ENST00000621967 LINC00587B1AMM8 73 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 C17orf112F2Z3M2 114 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 RBFOX2O43251 390 aaKnown RBP eCLIP14.38□□□□□ -0.11
FAM3A-222ENST00000621967 SIAH2O43255 324 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 RBMXL2O75526 392 aaKnown RBP14.38□□□□□ -0.11
FAM3A-222ENST00000621967 S100PP25815 95 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 SPINK9Q5DT21 86 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 GCSAMQ8N6F7 178 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 ZNF709Q8N972 641 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 ABHD5Q8WTS1 349 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 RAB24Q969Q5 203 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 WDR83OSQ9Y284 106 aa14.38□□□□□ -0.11
FAM3A-222ENST00000621967 RAI1Q7Z5J4 1906 aaPredicted RBP14.38□□□□□ -0.11
FAM3A-222ENST00000621967 SEC14L6B5MCN3 397 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 F2RL2O00254 374 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 HMGB3O15347 200 aaKnown RBP14.37□□□□□ -0.11
FAM3A-222ENST00000621967 LOXL3P58215 753 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 PDLIM3Q53GG5 364 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-222ENST00000621967 VHLLQ6RSH7 139 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 PPP1R35Q8TAP8 253 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 Q8TCH9 128 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 GGACTQ9BVM4 153 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 MIOXQ9UGB7 285 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-222ENST00000621967 ELOA3CA0A087WX78 387 aaPredicted RBP14.37□□□□□ -0.11
FAM3A-222ENST00000621967 TRGC1P0CF51 173 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 COX6B1P14854 86 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 RPS16P62249 146 aaKnown RBP14.37□□□□□ -0.11
FAM3A-222ENST00000621967 RPL23P62829 140 aaKnown RBP14.37□□□□□ -0.11
FAM3A-222ENST00000621967 ADIRFQ15847 76 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 NUP37Q8NFH4 326 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 FRZBQ92765 325 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 PYGO2Q9BRQ0 406 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 PARLQ9H300 379 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 GAR1Q9NY12 217 aaKnown RBP14.37□□□□□ -0.11
FAM3A-222ENST00000621967 GNG12Q9UBI6 72 aa14.37□□□□□ -0.11
FAM3A-222ENST00000621967 UTP20O75691 2785 aaKnown RBP14.36□□□□□ -0.11
FAM3A-222ENST00000621967 SOX15O60248 233 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 FCGR3BO75015 233 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 IGHV3-13P01766 116 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 PFN1P07737 140 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms