RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 VSIG4Q9Y279 399 aa13.95□□□□□ -0.18
SCAMP4-213ENST00000621748 TNCP24821 2201 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 SLC25A17O43808 307 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 SPDEFO95238 335 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 CA2P00918 260 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 IGLV2-23P01705 113 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 GNB1P62873 340 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 RUNX1Q01196 453 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 KLF9Q13886 244 aaPredicted RBP13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 ASPHD1Q5U4P2 390 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 PPP1R27Q86WC6 154 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 SLC38A6Q8IZM9 456 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 MOB3AQ96BX8 217 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 ADTRPQ96IZ2 230 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 HRASLSQ9HDD0 168 aa13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 C14orf166Q9Y224 244 aaKnown RBP13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 FOXA2Q9Y261 457 aaPredicted RBP13.94□□□□□ -0.18
SCAMP4-213ENST00000621748 TAGLNQ01995 201 aaKnown RBP13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 TMEM267Q0VDI3 215 aaPredicted RBP13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 AKIRIN2Q53H80 203 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 DEFB121Q5J5C9 76 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 IDO2Q6ZQW0 420 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 TCTEX1D1Q8N7M0 179 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 POC5Q8NA72 575 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 BVESQ8NE79 360 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 LFNGQ8NES3 379 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 OR51S1Q8NGJ8 323 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 OR1N2Q8NGR9 330 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 ALX4Q9H161 411 aaPredicted RBP13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 PRELID3BQ9Y3B1 194 aa13.93□□□□□ -0.18
SCAMP4-213ENST00000621748 SRRM4A7MD48 611 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 ARPC1BO15143 372 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 UPK1BO75841 260 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 CRYGBP07316 175 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 LGALS7P47929 136 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 SSBP2P81877 361 aaPredicted RBP13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 PJVKQ0ZLH3 352 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 CATR1Q13166 79 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 MSMO1Q15800 293 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 FAAP20Q6NZ36 180 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 UNQ5815/PRO19632Q6UWF5 114 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 OR4D10Q8NGI6 311 aa13.92□□□□□ -0.18
SCAMP4-213ENST00000621748 GPR31O00270 319 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 DUTP33316 252 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 UCP3P55916 312 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 ZNF616Q08AN1 781 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 FXYD3Q14802 87 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 TMEM177Q53S58 311 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 ZNF66Q6ZN08 573 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 CCDC71LQ8N9Z2 235 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 DDB2Q92466 427 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 HARBI1Q96MB7 349 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 SDHCQ99643 169 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 HSD17B10Q99714 261 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 CCL28Q9NRJ3 127 aa13.91□□□□□ -0.18
SCAMP4-213ENST00000621748 COL7A1Q02388 2944 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 IGKV1D-13A0A0B4J2D9 117 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 LINC00473A8K010 186 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 SEC14L6B5MCN3 397 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 IGKV1-13P0DP09 117 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 RRASP10301 218 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 RTL8BQ17RB0 113 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 C9orf66Q5T8R8 295 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 GRPEL2Q8TAA5 225 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 TCTEX1D2Q8WW35 142 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 ZNF486Q96H40 463 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 MS4A10Q96PG2 267 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 SLC25A21Q9BQT8 299 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 SLC2A8Q9NY64 477 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 COPZ2Q9P299 210 aa13.9□□□□□ -0.18
SCAMP4-213ENST00000621748 SORL1Q92673 2214 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 SHOXO15266 292 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 LYRM1O43325 122 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 OR8U8P0C7N1 319 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 SURF2Q15527 256 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 MRGPRG-AS1Q2M3A8 158 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 AADACL3Q5VUY0 350 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 KCTD9Q7L273 389 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 MARCH1Q8TCQ1 289 aa13.89□□□□□ -0.19
SCAMP4-213ENST00000621748 FAM240BA0A1B0GVZ2 78 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 TNFSF12O43508 249 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 CNIH1O95406 144 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 IGLV2-14P01704 120 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 ZNF735P0CB33 412 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 KIR2DS2P43631 304 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 RBMS2Q15434 407 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 PHLDA2Q53GA4 152 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 DCUN1D4Q92564 292 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 RSRP1Q9BUV0 290 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 FXYD6Q9H0Q3 95 aa13.88□□□□□ -0.19
SCAMP4-213ENST00000621748 RAMP3O60896 148 aa13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 CRYZL1O95825 349 aa13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 IGHV3-11P01762 117 aa13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 LGALS1P09382 135 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 GNRHRP30968 328 aa13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 TPPP2P59282 170 aa13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 ZNF818PQ6ZRF7 136 aa13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
SCAMP4-213ENST00000621748 OR5T1Q8NG75 326 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms