RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 CAV2P51636 162 aa12.8□□□□□ -0.36
CBWD3-216ENST00000621396 RELBQ01201 579 aa12.8□□□□□ -0.36
CBWD3-216ENST00000621396 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-216ENST00000621396 FAM71F2Q6NXP2 309 aa12.8□□□□□ -0.36
CBWD3-216ENST00000621396 LINC01356Q8N9X3 169 aa12.8□□□□□ -0.36
CBWD3-216ENST00000621396 INO80EQ8NBZ0 244 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-216ENST00000621396 OR4A16Q8NH70 328 aa12.8□□□□□ -0.36
CBWD3-216ENST00000621396 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-216ENST00000621396 FAM24AA6NFZ4 105 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 IFNA17P01571 189 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 IGKV1D-33P01593 117 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 IGKV1-33P01594 117 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 IGHV4-31P0DP07 118 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 HES1Q14469 280 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 TMUB2Q71RG4 321 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 PDPNQ86YL7 162 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 SMIM3Q9BZL3 60 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 TET2Q6N021 2002 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-216ENST00000621396 ATG12O94817 140 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 HRASP01112 189 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 PET100P0DJ07 73 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 F2RL1P55085 397 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 PAX9P55771 341 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 UBE2KP61086 200 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 IFITM2Q01629 132 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 NHLH2Q02577 135 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 TNFRSF9Q07011 255 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 CLCC1Q96S66 551 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 HINT2Q9BX68 163 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 ZC4H2Q9NQZ6 224 aa12.79□□□□□ -0.36
CBWD3-216ENST00000621396 NPFFO15130 113 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 SYNGR2O43760 224 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 IGLV2-23P01705 113 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 HKR1P10072 659 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 CEACAM3P40198 252 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 TMEM177Q53S58 311 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 FAM120AOSQ5T036 256 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 TMEM65Q6PI78 240 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 CFHR4Q92496 578 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 RBKSQ9H477 322 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 E7EUB6 86 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 VENTXO95231 258 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 SLC25A6P12236 298 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 LYL1P12980 280 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 RPL12P30050 165 aaKnown RBP12.78□□□□□ -0.36
CBWD3-216ENST00000621396 MC5RP33032 325 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 KLF17Q5JT82 389 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-216ENST00000621396 C10orf55Q5SWW7 151 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 ACOT7LQ6ZUV0 252 aa12.78□□□□□ -0.36
CBWD3-216ENST00000621396 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-216ENST00000621396 CST7O76096 145 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 S100A11P31949 105 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 OPCMLQ14982 345 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.37
CBWD3-216ENST00000621396 TMEM217Q8N7C4 229 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 PAIP2BQ9ULR5 123 aaKnown RBP12.77□□□□□ -0.37
CBWD3-216ENST00000621396 E5RGE8 158 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 SNRNP70P08621 437 aaKnown RBP12.77□□□□□ -0.37
CBWD3-216ENST00000621396 APELAP0DMC3 54 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 PRSS57Q6UWY2 283 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 C11orf1Q9H5F2 150 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 COA4Q9NYJ1 87 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 HSPB7Q9UBY9 170 aa12.77□□□□□ -0.37
CBWD3-216ENST00000621396 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 A0A0U1RQK1 487 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 RRASP10301 218 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 VAMP2P63027 116 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 TMEM267Q0VDI3 215 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-216ENST00000621396 SPANXN5Q5MJ07 72 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 GPR157Q5UAW9 335 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 FBXL15Q9H469 300 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 IGSF23A1L1A6 192 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 SNAPC5O75971 98 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 KBTBD11O94819 623 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-216ENST00000621396 NUP50Q9UKX7 468 aa12.76□□□□□ -0.37
CBWD3-216ENST00000621396 TRAV20A0A0B4J274 112 aa12.75□□□□□ -0.37
CBWD3-216ENST00000621396 C15orf61A6NNL5 157 aa12.75□□□□□ -0.37
CBWD3-216ENST00000621396 SPDEFO95238 335 aa12.75□□□□□ -0.37
CBWD3-216ENST00000621396 MMDQ15546 238 aa12.75□□□□□ -0.37
CBWD3-216ENST00000621396 OR2C3Q8N628 320 aa12.75□□□□□ -0.37
CBWD3-216ENST00000621396 OR10W1Q8NGF6 305 aa12.75□□□□□ -0.37
CBWD3-216ENST00000621396 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-216ENST00000621396 UPK2O00526 184 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 FCN1O00602 326 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 TXNL1O43396 289 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 MINOS1Q5TGZ0 78 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 PUSL1Q8N0Z8 303 aaKnown RBP12.74□□□□□ -0.37
CBWD3-216ENST00000621396 KCNRGQ8N5I3 272 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 MALSU1Q96EH3 234 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 EAF1Q96JC9 268 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-216ENST00000621396 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 OR51B2Q9Y5P1 312 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 MINOS1-NBL1R4GNA1 71 aa12.74□□□□□ -0.37
CBWD3-216ENST00000621396 MDFIC2A0A1B0GVS7 189 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms