RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TM2D3Q9BRN9 247 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 TNFSF12O43508 249 aa18.26■□□□□ 0.51
ATXN3-253ENST00000621269 MSMO1Q15800 293 aa18.26■□□□□ 0.51
ATXN3-253ENST00000621269 C15orf32Q32M92 178 aa18.26■□□□□ 0.51
ATXN3-253ENST00000621269 OR13F1Q8NGS4 319 aa18.26■□□□□ 0.51
ATXN3-253ENST00000621269 GPHA2Q96T91 129 aa18.26■□□□□ 0.51
ATXN3-253ENST00000621269 AIFM2Q9BRQ8 373 aa18.26■□□□□ 0.51
ATXN3-253ENST00000621269 CCL28Q9NRJ3 127 aa18.26■□□□□ 0.51
ATXN3-253ENST00000621269 NPIPB5A8MRT5 1133 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 TEX22C9J3V5 150 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 PTHLHP12272 177 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 BRWD1-AS2P59051 145 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 SSX9Q7RTT3 188 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 KCTD12Q96CX2 325 aaKnown RBP18.25■□□□□ 0.51
ATXN3-253ENST00000621269 AUNIPQ9H7T9 357 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 TUBA4BQ9H853 241 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 SLC2A9Q9NRM0 540 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 FBXL7Q9UJT9 491 aa18.25■□□□□ 0.51
ATXN3-253ENST00000621269 TMEM127O75204 238 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 DHFRP00374 187 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 PPYP01298 95 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 IL6RP08887 468 aaPredicted RBP18.24■□□□□ 0.51
ATXN3-253ENST00000621269 CASC10Q5T4H9 136 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 ZBTB34Q8NCN2 500 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 OR2K2Q8NGT1 345 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 SLC5A7Q9GZV3 580 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 RYR3Q15413 4870 aa18.24■□□□□ 0.51
ATXN3-253ENST00000621269 FCER2P06734 321 aa18.23■□□□□ 0.51
ATXN3-253ENST00000621269 ZNF735P0CB33 412 aa18.23■□□□□ 0.51
ATXN3-253ENST00000621269 LYL1P12980 280 aa18.23■□□□□ 0.51
ATXN3-253ENST00000621269 CBX5P45973 191 aa18.23■□□□□ 0.51
ATXN3-253ENST00000621269 RPL8P62917 257 aaKnown RBP18.23■□□□□ 0.51
ATXN3-253ENST00000621269 KCTD21Q4G0X4 260 aa18.23■□□□□ 0.51
ATXN3-253ENST00000621269 SPAG16Q8N0X2 631 aa18.23■□□□□ 0.51
ATXN3-253ENST00000621269 CITED4Q96RK1 184 aa18.23■□□□□ 0.51
ATXN3-253ENST00000621269 IZUMO1RA6ND01 250 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 PPP5D1E7EU14 171 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 E7EUB6 86 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 GGCTO75223 188 aaKnown RBP18.22■□□□□ 0.51
ATXN3-253ENST00000621269 MECP2P51608 486 aaKnown RBP18.22■□□□□ 0.51
ATXN3-253ENST00000621269 FXYD4P59646 89 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 CATR1Q13166 79 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 TIMM50Q3ZCQ8 353 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 CROCCP3Q8IVE0 287 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 OR4A5Q8NH83 315 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 THAP7Q9BT49 309 aaPredicted RBP18.22■□□□□ 0.51
ATXN3-253ENST00000621269 HRASLSQ9HDD0 168 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 PALMDQ9NP74 551 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 STAB2Q8WWQ8 2551 aa18.22■□□□□ 0.51
ATXN3-253ENST00000621269 SULT1C2O00338 296 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 HLA-GP17693 338 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 PSMB6P28072 239 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 C19orf35Q6ZS72 473 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 OR5AP2Q8NGF4 316 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 DYNLRB2Q8TF09 96 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 S100A16Q96FQ6 103 aaKnown RBP18.21■□□□□ 0.51
ATXN3-253ENST00000621269 SPATA25Q9BR10 227 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 BET1LQ9NYM9 111 aa18.21■□□□□ 0.51
ATXN3-253ENST00000621269 HUWE1Q7Z6Z7 4374 aaKnown RBP18.21■□□□□ 0.5
ATXN3-253ENST00000621269 RBFOX2O43251 390 aaKnown RBP eCLIP18.2■□□□□ 0.5
ATXN3-253ENST00000621269 CRYGCP07315 174 aa18.2■□□□□ 0.5
ATXN3-253ENST00000621269 DEFA4P12838 97 aa18.2■□□□□ 0.5
ATXN3-253ENST00000621269 AREGP15514 252 aa18.2■□□□□ 0.5
ATXN3-253ENST00000621269 HIST1H1BP16401 226 aaKnown RBP18.2■□□□□ 0.5
ATXN3-253ENST00000621269 OR4A47Q6IF82 309 aa18.2■□□□□ 0.5
ATXN3-253ENST00000621269 GIMAP1Q8WWP7 306 aa18.2■□□□□ 0.5
ATXN3-253ENST00000621269 IFT46Q9NQC8 304 aa18.2■□□□□ 0.5
ATXN3-253ENST00000621269 A0A1B0GW64 132 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 MEIS3P1A6NDR6 274 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 XRCC3O43542 346 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 OR2C1O95371 312 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 HPRT1P00492 218 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 IGHV3-23P01764 117 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 HLA-AP01891 365 aaKnown RBP18.19■□□□□ 0.5
ATXN3-253ENST00000621269 TAS2R31P59538 309 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 HAGHQ16775 308 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 CD300EQ496F6 205 aaPredicted RBP18.19■□□□□ 0.5
ATXN3-253ENST00000621269 EEF1AKMT3Q96AZ1 226 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 DMRT1Q9Y5R6 373 aa18.19■□□□□ 0.5
ATXN3-253ENST00000621269 NDUFB8O95169 186 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 ARL3P36405 182 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 CD81P60033 236 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 HERV-K104P61576 105 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 CLEC19AQ6UXS0 136 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 ADAMTSL5Q6ZMM2 481 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 TMEM17Q86X19 198 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 LAX1Q8IWV1 398 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 BORCS5Q969J3 196 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 FANCD2OSQ96PS1 177 aa18.18■□□□□ 0.5
ATXN3-253ENST00000621269 C2orf70A6NJV1 201 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 LGALS9O00182 355 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 REG1AP05451 166 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 FOLR2P14207 255 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 MYOD1P15172 320 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 NQO2P16083 231 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 CTRB1P17538 263 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 UBE2NLQ5JXB2 153 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 AADACL3Q5VUY0 350 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 CTRB2Q6GPI1 263 aa18.17■□□□□ 0.5
ATXN3-253ENST00000621269 ZNF818PQ6ZRF7 136 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms