RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 BPIFCQ8NFQ6 507 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 CASTOR1Q8WTX7 329 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 ARPC5LQ9BPX5 153 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 PDCD10Q9BUL8 212 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 CHMP1AQ9HD42 196 aaPredicted RBP6.14□□□□□ -1.43
CLK1-215ENST00000621181 GAR1Q9NY12 217 aaKnown RBP6.14□□□□□ -1.43
CLK1-215ENST00000621181 OR6C3Q9NZP0 311 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 KBTBD11-OT1A0A1B0GTJ5 212 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 A0A1W2PPI3 338 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 J3QR06 171 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 HSPB6O14558 160 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 IFNA6P05013 189 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 CTRB1P17538 263 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 VAMP1P23763 118 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 CDX1P47902 265 aaPredicted RBP6.13□□□□□ -1.43
CLK1-215ENST00000621181 GNG10P50151 68 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 RAB7AP51149 207 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 CYCSP99999 105 aaKnown RBP6.13□□□□□ -1.43
CLK1-215ENST00000621181 PDZK1IP1Q13113 114 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 C17orf58Q2M2W7 97 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 LRRC37A5PQ49AS3 106 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 CTRB2Q6GPI1 263 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 LHFPL2Q6ZUX7 228 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 KCTD9Q7L273 389 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 OR5D18Q8NGL1 313 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 OR1S2Q8NGQ3 325 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 OR10X1Q8NGY0 326 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 THAP6Q8TBB0 222 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 LEAP2Q969E1 77 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 MARC2Q969Z3 335 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 COQ2Q96H96 371 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 AQP10Q96PS8 301 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 ZNF471Q9BX82 626 aaPredicted RBP6.13□□□□□ -1.43
CLK1-215ENST00000621181 PECRQ9BY49 303 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 IGKV1D-8A0A087WSZ0 117 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 MSGN1A6NI15 193 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 LINC01548A6NM66 108 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 SLC33A1O00400 549 aaPredicted RBP6.13□□□□□ -1.43
CLK1-215ENST00000621181 CRTAPO75718 401 aaPredicted RBP6.13□□□□□ -1.43
CLK1-215ENST00000621181 PGAM2P15259 253 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 FOXE3Q13461 319 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 DIAPH2-AS1Q14236 149 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 KIR2DS1Q14954 304 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 SURF2Q15527 256 aaPredicted RBP6.13□□□□□ -1.43
CLK1-215ENST00000621181 LTC4SQ16873 150 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 ELP2Q6IA86 826 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 PRSS54Q6PEW0 395 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 ASCL4Q6XD76 172 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 TMEM17Q86X19 198 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 OR5H2Q8NGV7 314 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 SPSB1Q96BD6 273 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 OR10C1Q96KK4 312 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 URM1Q9BTM9 101 aaKnown RBP6.13□□□□□ -1.43
CLK1-215ENST00000621181 PSG11Q9UQ72 335 aa6.13□□□□□ -1.43
CLK1-215ENST00000621181 IGKV1-12A0A0C4DH73 117 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 LCE6AA0A183 80 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 TMEM218A2RU14 115 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 FAM74A7A6NL05 159 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 FAM25EA8MYX2 175 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 TSPAN4O14817 238 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 DEGS1O15121 323 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 ADAP1O75689 374 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 IGKV1D-12P01611 117 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 HCKP08631 526 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 ADCYAP1P18509 176 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 GPR12P47775 334 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 TAS2R46P59540 309 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 FAM74A3Q4VXF1 159 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 FAM122CQ6P4D5 195 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 MOB3BQ86TA1 216 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 TGIF2LXQ8IUE1 241 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 SBSPONQ8IVN8 264 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 BAP18Q8IXM2 172 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 INO80EQ8NBZ0 244 aaPredicted RBP6.12□□□□□ -1.43
CLK1-215ENST00000621181 OR51T1Q8NGJ9 327 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 C4orf3Q8WVX3 66 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 C2orf50Q96LR7 162 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 Q96M66 194 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 SCGB3A2Q96PL1 93 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 SLC5A7Q9GZV3 580 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 ZMAT4Q9H898 229 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 CALYQ9NYX4 217 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 PRR13Q9NZ81 148 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 OR5AC2Q9NZP5 309 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
CLK1-215ENST00000621181 IGHV3-72A0A0B4J1Y9 119 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 C13orf42A0A1B0GVH6 325 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 C5orf51A6NDU8 294 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 HSD17B6O14756 317 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 ATG12O94817 140 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 APOC3P02656 99 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 CSTBP04080 98 aaKnown RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 ELANEP08246 267 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 TPT1P13693 172 aaKnown RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 ATF4P18848 351 aaPredicted RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 PI3P19957 117 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 VDAC1P21796 283 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 BLVRBP30043 206 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms