RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 C22orf15Q8WYQ4 148 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 C2orf50Q96LR7 162 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 HARBI1Q96MB7 349 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 ZNF436Q9C0F3 470 aaPredicted RBP6.42□□□□□ -1.38
CPNE3-209ENST00000620393 PLSCR3Q9NRY6 295 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.42□□□□□ -1.38
CPNE3-209ENST00000620393 BET1LQ9NYM9 111 aa6.42□□□□□ -1.38
CPNE3-209ENST00000620393 ACANP16112 2415 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 MDFIC2A0A1B0GVS7 189 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 A6NDX4 124 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 UPK2O00526 184 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 RRHO14718 337 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 SNAPC5O75971 98 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 SPDEFO95238 335 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 SAA1P0DJI8 122 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 TMEM11P17152 192 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 CNTFRP26992 372 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 IER3P46695 156 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 SMCO1Q147U7 214 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 IZUMO4Q1ZYL8 232 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 IAH1Q2TAA2 248 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 THOC7Q6I9Y2 204 aaKnown RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 OR4A47Q6IF82 309 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 IL17RELQ6ZVW7 336 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 ZBTB8BQ8NAP8 495 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 OR8H1Q8NGG4 311 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 OR4A16Q8NH70 328 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 OR4A5Q8NH83 315 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 VSTM2AQ8TAG5 236 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 TMEM167AQ8TBQ9 72 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 ASB13Q8WXK3 278 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 WDR89Q96FK6 387 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 ZNF48Q96MX3 618 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 SPIN2AQ99865 258 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 SPIN2BQ9BPZ2 258 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 CHIAQ9BZP6 476 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 NMES1Q9C002 83 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 GSX1Q9H4S2 264 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 RANBP3Q9H6Z4 567 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-209ENST00000620393 TMEM140Q9NV12 185 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 COA4Q9NYJ1 87 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 C1RLQ9NZP8 487 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 GSKIPQ9P0R6 139 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 SVEP1Q4LDE5 3571 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 OTOGQ6ZRI0 2925 aa6.41□□□□□ -1.38
CPNE3-209ENST00000620393 ZANQ9Y493 2812 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 TEX15Q9BXT5 2789 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 TRAV3A0A0B4J244 114 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 NCBP2LA6PVI3 153 aaKnown RBP6.4□□□□□ -1.38
CPNE3-209ENST00000620393 H3BUX3 64 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 NBR2O15453 112 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 SLC25A17O43808 307 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 CCNKO75909 580 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 KBTBD11O94819 623 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 NDUFA3O95167 84 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 GIPP09681 153 aaPredicted RBP6.4□□□□□ -1.38
CPNE3-209ENST00000620393 OR9G9P0C7N8 305 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 RAP2BP61225 183 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 CD83Q01151 205 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 ID3Q02535 119 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 SCGB2A2Q13296 93 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 AARDQ4LEZ3 155 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 FBLN7Q53RD9 439 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 CXorf66Q5JRM2 361 aaPredicted RBP6.4□□□□□ -1.38
CPNE3-209ENST00000620393 OR4D5Q8NGN0 318 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 OR5R1Q8NH85 324 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 ST6GAL2Q96JF0 529 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 RBM14Q96PK6 669 aaKnown RBP6.4□□□□□ -1.38
CPNE3-209ENST00000620393 FYTTD1Q96QD9 318 aaKnown RBP6.4□□□□□ -1.38
CPNE3-209ENST00000620393 NEURL2Q9BR09 285 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 PDCD10Q9BUL8 212 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 FKBP11Q9NYL4 201 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 KIAA1456Q9P272 454 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 METTL1Q9UBP6 276 aaKnown RBP6.4□□□□□ -1.38
CPNE3-209ENST00000620393 CACNG5Q9UF02 275 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 CACFD1Q9UGQ2 172 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 PITPNC1Q9UKF7 332 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 CDC42EP3Q9UKI2 254 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 PRNDQ9UKY0 176 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 TCF19Q9Y242 345 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 NSG2Q9Y328 171 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 SIGLEC9Q9Y336 463 aa6.4□□□□□ -1.38
CPNE3-209ENST00000620393 FLNAP21333 2647 aaKnown RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 FAM90A26D6RGX4 464 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 FCN1O00602 326 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 PFDN1O60925 122 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 OR2F2O95006 317 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 IGHV4-59P01825 116 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 FGF2P09038 288 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 PSMB6P28072 239 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 MAS1LP35410 378 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 NKX2-1P43699 371 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 HSPE1P61604 102 aaKnown RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 RPL8P62917 257 aaKnown RBP6.39□□□□□ -1.39
CPNE3-209ENST00000620393 MMDQ15546 238 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 LY6EQ16553 131 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 PRSS8Q16651 343 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 C5orf64Q2M2E5 130 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 MRGPRG-AS1Q2M3A8 158 aa6.39□□□□□ -1.39
CPNE3-209ENST00000620393 C16orf82Q7Z2V1 217 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms