RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 VMA21Q3ZAQ7 101 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 MIDNQ504T8 468 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 MRPL41Q8IXM3 137 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 C11orf42Q8N5U0 333 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 ZNF680Q8NEM1 530 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 OR4A5Q8NH83 315 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 SMIM8Q96KF7 97 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 NABP2Q9BQ15 211 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 MRPL20Q9BYC9 149 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 HIPK2Q9H2X6 1198 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 UNKLQ9H9P5 680 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 PSENENQ9NZ42 101 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 DPM3Q9P2X0 92 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 HSPB7Q9UBY9 170 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 A0A0G2JRQ6 117 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 DFFBO76075 338 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 TOX4O94842 621 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 DVL1P1P54792 670 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 SPCS3P61009 180 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 UBE2KP61086 200 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 LMO4P61968 165 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 RPS16P62249 146 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 TMEM177Q53S58 311 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 MINOS1Q5TGZ0 78 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 SSX9Q7RTT3 188 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 OR8H3Q8N146 312 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 LRRC20Q8TCA0 184 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 ST6GALNAC6Q969X2 333 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 HARBI1Q96MB7 349 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 LPAR2Q9HBW0 351 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 MINOS1-NBL1R4GNA1 71 aa13.64□□□□□ -0.23
TRAPPC3-210ENST00000617904 H0YJW9 148 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 SPDEFO95238 335 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 FGF2P09038 288 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 P0C879 139 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 CLEC12BQ2HXU8 276 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 MOB3BQ86TA1 216 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 ZNF429Q86V71 674 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 SCARB1Q8WTV0 552 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 TSNAXQ99598 290 aaKnown RBP13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 RNF5Q99942 180 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 BET1LQ9NYM9 111 aa13.63□□□□□ -0.23
TRAPPC3-210ENST00000617904 VWC2LB2RUY7 222 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 RNF223E7ERA6 249 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 CRLF1O75462 422 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 USF1P22415 310 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 BRWD1-AS2P59051 145 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 VMO1Q7Z5L0 202 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 BAP18Q8IXM2 172 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 MAPK1IP1LQ8NDC0 245 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 OR1S2Q8NGQ3 325 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 STOML3Q8TAV4 291 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 DTD1Q8TEA8 209 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 ST8SIA2Q92186 375 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 MS4A7Q9GZW8 240 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 RBKSQ9H477 322 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 SIRT7Q9NRC8 400 aa13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 STRAPQ9Y3F4 350 aaKnown RBP13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 TBL2Q9Y4P3 447 aaKnown RBP13.62□□□□□ -0.23
TRAPPC3-210ENST00000617904 NXPH3O95157 252 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 IFNA5P01569 189 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 GATA3P23771 443 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 REG1BP48304 166 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 SULT1A1P50225 295 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 EWSR1Q01844 656 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 EXOSC2Q13868 293 aaKnown RBP13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 TPTE2P1Q5T6R2 138 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 Q6ZRM9 215 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 TMEM252Q8N6L7 170 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 Q8N7P7 452 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 REG4Q9BYZ8 158 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 ZNF257Q9Y2Q1 563 aa13.61□□□□□ -0.23
TRAPPC3-210ENST00000617904 CR1P17927 2039 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 YLPM1P49750 1951 aaKnown RBP13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 C15orf61A6NNL5 157 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 IZUMO4Q1ZYL8 232 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 AARDQ4LEZ3 155 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 OR4P4Q8NGL7 312 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 FBXL17Q9UF56 701 aa13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 FOXA2Q9Y261 457 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC3-210ENST00000617904 IGHV1-3A0A0C4DH29 117 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 FAM24AA6NFZ4 105 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 MSGN1A6NI15 193 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 ACTL6BO94805 426 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 KBTBD11O94819 623 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 IAPPP10997 89 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 ZFP36P26651 326 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 CD1BP29016 333 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 UBE2E1P51965 193 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 F2RL1P55085 397 aa13.59□□□□□ -0.23
TRAPPC3-210ENST00000617904 LINC00205P59089 165 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms