RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 TIMM23BQ5SRD1 257 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 ATOH7Q8N100 152 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 OR9G4Q8NGQ1 327 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 AICDAQ9GZX7 198 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 TNFRSF19Q9NS68 423 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 MRPS16Q9Y3D3 137 aaKnown RBP8.73□□□□□ -1.01
CUL4A-212ENST00000617546 LOC389332A0A1B0GUA5 103 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 A0A1W2PQF6 199 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 A0A1W2PRE2 83 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 PCSK4Q6UW60 755 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 MESP1Q9BRJ9 268 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 IDI2-AS1Q9NZ38 188 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 MRPL27Q9P0M9 148 aaKnown RBP8.73□□□□□ -1.01
CUL4A-212ENST00000617546 LOC101059948A0A1B0GTJ6 334 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 TMEM262E9PQX1 116 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 F5H697 171 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 PEX7O00628 323 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 GZMBP10144 247 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 PRSS12P56730 875 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 AMMECR1LQ6DCA0 310 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 EAF1Q96JC9 268 aaPredicted RBP8.73□□□□□ -1.01
CUL4A-212ENST00000617546 ZNF488Q96MN9 340 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 DERL1Q9BUN8 251 aa8.73□□□□□ -1.01
CUL4A-212ENST00000617546 PPP1R17O96001 155 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 UCP2P55851 309 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 HSD52Q0P140 79 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 TEX38Q6PEX7 206 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 RBPMS2Q6ZRY4 209 aaKnown RBP8.72□□□□□ -1.01
CUL4A-212ENST00000617546 ZNF664Q8N3J9 261 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 NUDT11Q96G61 164 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 TMEM208Q9BTX3 173 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 C1QTNF5Q9BXJ0 243 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 ZNF576Q9H609 170 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 MCM3APO60318 1980 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 LOC107984156A0A0G2JMH3 177 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 A0A1W2PPE3 182 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 C2CD4DB7Z1M9 353 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 LYZL6O75951 148 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 ATP5G3P48201 142 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 ZNF83P51522 516 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 DNM1P46Q6ZS02 220 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 MOGAT3Q86VF5 341 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 ARL17AQ8IVW1 177 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 OR4A5Q8NH83 315 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 MRPL13Q9BYD1 178 aaKnown RBP8.72□□□□□ -1.01
CUL4A-212ENST00000617546 GP6Q9HCN6 339 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 IGHV1-69-2A0A0G2JMI3 117 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 MEF2CQ06413 473 aaPredicted RBP8.72□□□□□ -1.01
CUL4A-212ENST00000617546 SPANXN1Q5VSR9 72 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 SLC25A2Q9BXI2 301 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 PSME4Q14997 1843 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 PROB1E7EW31 1015 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 MMP23AO75900 390 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 LGALS7P47929 136 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 GFI1BQ5VTD9 330 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 RAB1CQ92928 201 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 WNT16Q9UBV4 365 aa8.72□□□□□ -1.01
CUL4A-212ENST00000617546 IGKV3D-11A0A0A0MRZ8 115 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 ALKBH6Q3KRA9 238 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 IGHV1-45A0A0A0MS14 117 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 A0A1B0GUT8 65 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 PRR32B1ATL7 298 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 TFF3Q07654 80 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 FAM222BQ8WU58 562 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 SRSF12Q8WXF0 261 aaKnown RBP8.71□□□□□ -1.01
CUL4A-212ENST00000617546 LPAR2Q9HBW0 351 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 CALYQ9NYX4 217 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 LOC285556D6RIA3 1793 aa8.71□□□□□ -1.01
CUL4A-212ENST00000617546 ITGB1BP1O14713 200 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 GDF9O60383 454 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 IGHV4-34P06331 123 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 FAM90A1Q86YD7 464 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 OR52E5Q8NH55 327 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 PCM1Q15154 2024 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 OR11H12B2RN74 326 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 C3orf80F5H4A9 247 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 RBFOX2O43251 390 aaKnown RBP eCLIP8.71□□□□□ -1.023e-7■■■□□ 16.8
CUL4A-212ENST00000617546 OR11H1Q8NG94 326 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 OR1N2Q8NGR9 330 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 OR11H2Q8NH07 326 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 IFI27L2Q9H2X8 130 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 INSIG2Q9Y5U4 225 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 NYNRINQ9P2P1 1898 aaKnown RBP8.71□□□□□ -1.02
CUL4A-212ENST00000617546 CCDC144NLQ6NUI1 221 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 Q6ZS49 121 aa8.71□□□□□ -1.02
CUL4A-212ENST00000617546 PDCD11Q14690 1871 aaKnown RBP8.71□□□□□ -1.02
CUL4A-212ENST00000617546 TIMP3P35625 211 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 WDR83OSQ9Y284 106 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 IGLV3-32A0A0A0MS00 114 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 A0A0A6YYD4 124 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 LDLRAD2Q5SZI1 272 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 ANAPC10Q9UM13 185 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 IGHV5-10-1A0A0J9YXX1 117 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 IZUMO4Q1ZYL8 232 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 Q6ZS52 159 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 TMEM144Q7Z5S9 345 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 OSR1Q8TAX0 266 aaPredicted RBP8.7□□□□□ -1.02
CUL4A-212ENST00000617546 CT55Q8WUE5 264 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 ONECUT1Q9UBC0 465 aa8.7□□□□□ -1.02
CUL4A-212ENST00000617546 PGPEP1LA6NFU8 196 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms