RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 MRM2Q9UI43 246 aaKnown RBP6.91□□□□□ -1.3
GPC6-202ENST00000617456 URGCP-MRPS24S4R325 110 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 COL7A1Q02388 2944 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 A0A0D9SG52 128 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 A0A1W2PRX2 142 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 K7EIL1 84 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 K7N7A8 449 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 MFNGO00587 321 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 SYT7O43581 403 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 SSNA1O43805 119 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 TFF1P04155 84 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 CHRM2P08172 466 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 MRPL3P09001 348 aaKnown RBP6.9□□□□□ -1.3
GPC6-202ENST00000617456 CD33P20138 364 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 EPHA2P29317 976 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 TGFBR1P36897 503 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 GABRA2P47869 451 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 MTNR1BP49286 362 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 RAB9AP51151 201 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 SCAND1P57086 179 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 SNRPGP62308 76 aaKnown RBP6.9□□□□□ -1.3
GPC6-202ENST00000617456 RPL31P62899 125 aaKnown RBP6.9□□□□□ -1.3
GPC6-202ENST00000617456 BDH1Q02338 343 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 MEF2CQ06413 473 aaPredicted RBP6.9□□□□□ -1.3
GPC6-202ENST00000617456 RHEBQ15382 184 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 VAMP3Q15836 100 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 IQCJQ1A5X6 159 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 PYDC2Q56P42 97 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 ZNRF1Q8ND25 227 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 ZNF738Q8NE65 137 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 OR4P4Q8NGL7 312 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 OR56B4Q8NH76 319 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 SLC25A46Q96AG3 418 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 PINX1Q96BK5 328 aaKnown RBP6.9□□□□□ -1.3
GPC6-202ENST00000617456 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 AJUBAQ96IF1 538 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 OR5B12Q96R08 314 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 OR4F4Q96R69 305 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 CLCC1Q96S66 551 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 OR51E2Q9H255 320 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 VAX2Q9UIW0 290 aa6.9□□□□□ -1.3
GPC6-202ENST00000617456 RNF222A6NCQ9 220 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 FBLL1A6NHQ2 334 aaKnown RBP6.89□□□□□ -1.31
GPC6-202ENST00000617456 FAM90A8PA6NJQ4 464 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 C17orf98A8MV24 154 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 PRR32B1ATL7 298 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 J3QRE1 110 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 K7EQM0 130 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 M0R036 132 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 MAGEB4O15481 346 aaPredicted RBP6.89□□□□□ -1.31
GPC6-202ENST00000617456 ANGPTL7O43827 346 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 CHST1O43916 411 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 MPZL2O60487 215 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 SDC2P34741 201 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 DYNLT3P51808 116 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 AESQ08117 197 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 MFGE8Q08431 387 aaPredicted RBP6.89□□□□□ -1.31
GPC6-202ENST00000617456 ZNF345Q14585 488 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 CLINT1Q14677 625 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 LRRC75BQ2VPJ9 315 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 GGNBP1Q5YKI7 109 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 MKXQ8IYA7 352 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 Q8N402 240 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 DAZAP1Q96EP5 407 aaKnown RBP6.89□□□□□ -1.31
GPC6-202ENST00000617456 HARBI1Q96MB7 349 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 PBDC1Q9BVG4 233 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
GPC6-202ENST00000617456 PLEKHA1Q9HB21 404 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 OR2S2Q9NQN1 319 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 LYRM2Q9NU23 88 aaPredicted RBP6.89□□□□□ -1.31
GPC6-202ENST00000617456 PSORS1C1Q9UIG5 152 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 ORC6Q9Y5N6 252 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 DNAH9Q9NYC9 4486 aa6.89□□□□□ -1.31
GPC6-202ENST00000617456 WI2-2373I1.2A0A1W2PRP0 233 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 ADARB2-AS1A8MUL3 147 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 SNRPGP15A8MWD9 76 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 PPP5D1E7EU14 171 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 J3QL48 77 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 SYNGR1O43759 233 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 ZNF737O75373 536 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 CYB5AP00167 134 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 MT-CO2P00403 227 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 IL5P05113 134 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 NFYBP25208 207 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 S100A7P31151 101 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 LGALS4P56470 323 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 CD69Q07108 199 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 PJVKQ0ZLH3 352 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 ZNF146Q15072 292 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 SPIN3Q5JUX0 258 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 TMEM268Q5VZI3 342 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 OR10K2Q6IF99 312 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 PRR27Q6MZM9 219 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 HCP5Q6MZN7 132 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 CRIP3Q6Q6R5 217 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms