RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 IL20Q9NYY1 176 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGSF23A1L1A6 192 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TRDCB7Z8K6 153 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 APCSP02743 223 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 CD74P04233 296 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MAFIPQ8WZ33 124 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MGLLQ99685 303 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 RTN4RQ9BZR6 473 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 NHP2Q9NX24 153 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 ZNF735P0CB33 412 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ASAH1Q13510 395 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 GHSRQ92847 366 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 CHST5Q9GZS9 411 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 GPR183P32249 361 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 H3F3AP84243 136 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 FMODQ06828 376 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 CNIH2Q6PI25 160 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MOGAT1Q96PD6 335 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 NPIPB13A6NJU9 1138 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 NPIPB4C9JG80 1138 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ACVR1Q04771 509 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SLC35E4Q6ICL7 350 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 OR8B4Q96RC9 309 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 FRRS1LQ9P0K9 344 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 CEACAM18A8MTB9 384 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 RHODO00212 210 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SLURP1P55000 103 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGSF11Q5DX21 431 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 PVRIGQ6DKI7 326 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TEX261Q6UWH6 196 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ACOT7LQ6ZUV0 252 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SVIPQ8NHG7 77 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 C11orf45Q8TAV5 145 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ZC2HC1AQ96GY0 325 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 NEU1Q99519 415 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 U3KQ87 197 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGHV1-18A0A0C4DH31 117 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 H0Y8G0 127 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 LYPD3O95274 346 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ATP5G1P05496 136 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 HOXB5P09067 269 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGHV1-2P23083 117 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SAA4P35542 130 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ATP5G3P48201 142 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 CDC34P49427 236 aaPredicted RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 ADORA2A-AS1P86434 159 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IL24Q13007 206 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 NHLRC3Q5JS37 347 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ABLIM2Q6H8Q1 611 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TAS2R4Q9NYW5 299 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 UBE2L5PA0A1B0GUS4 154 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 LINC00862A6NCI5 91 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 GZMBP10144 247 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 HIST1H1CP16403 213 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 RPS27AP62979 156 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 UBA52P62987 128 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 KISS1Q15726 138 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 COX19Q49B96 90 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SLC24A4Q8NFF2 622 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 OR51G1Q8NGK1 321 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MRPL32Q9BYC8 188 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 MED20Q9H944 212 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TAF9BQ9HBM6 251 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 DEFB108AA8MXU0 73 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 HMGN4O00479 90 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 RER1O15258 196 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MLLT11Q13015 90 aaPredicted RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 ZNF791Q3KP31 576 aaPredicted RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 C1orf220Q5T0J3 134 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 PRSS54Q6PEW0 395 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 FAM212BQ9NTI7 297 aaPredicted RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 PCP4L1A6NKN8 68 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SLC17A1Q14916 467 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 VAMP3Q15836 100 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SPRED2Q7Z698 418 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 LINC01555Q8NAE3 123 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TRAV8-1A0A0A6YYK1 113 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGKV3OR2-268A0A0C4DH90 116 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 LY6G6DO95868 133 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 FCGR2CP31995 323 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 CLDN20P56880 219 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SLC25A53Q5H9E4 307 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MBNL2Q5VZF2 373 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 APOOLQ6UXV4 268 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TAS2R5Q9NYW4 299 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MRPL27Q9P0M9 148 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 C15orf61A6NNL5 157 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 GATCO43716 136 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 ELK1P19419 428 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TIAL1Q01085 375 aaKnown RBP eCLIP2.81□□□□□ -1.96
LPP-220ENST00000617246 FAM27BQ5VT28 67 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 C22orf42Q6IC83 251 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SMIM12Q96EX1 92 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 RSG1Q9BU20 258 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 GORASP2Q9H8Y8 452 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IFI27P40305 119 aaPredicted RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 MRM1Q6IN84 353 aaKnown RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 SPATA3Q8NHX4 192 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 DNAJC15Q9Y5T4 150 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms