RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 ZNF808Q8N4W9 903 aaPredicted RBP9.32□□□□□ -0.92
ATF3-211ENST00000613954 Q8N7P7 452 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 CNEP1R1Q8N9A8 125 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 OR10G8Q8NGN5 311 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 ABHD17AQ96GS6 310 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 ATG101Q9BSB4 218 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 FREM1Q5H8C1 2179 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 CDIPTO14735 213 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 TNFSF13O75888 250 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 HPRT1P00492 218 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 STAG3L2P0CL84 134 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 STAG3L3P0CL85 134 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 IGHV1-2P23083 117 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 TIMP3P35625 211 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 UBE2G2P60604 165 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 TMEM183BQ1AE95 376 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 AARDQ4LEZ3 155 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 KRTCAP3Q53RY4 240 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 OR51B6Q9H340 312 aa9.32□□□□□ -0.92
ATF3-211ENST00000613954 TRAV38-1A0A0B4J264 116 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 MBD3L4A6NDZ8 208 aaPredicted RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 MBD3L3A6NE82 208 aaPredicted RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 MBD3L5A6NJ08 208 aaPredicted RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 MARCH11A6NNE9 402 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 C15orf62A8K5M9 175 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 DLL1O00548 723 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 HBZP02008 142 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 SELEP16581 610 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 BRWD1-AS2P59051 145 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 RPL19P84098 196 aaKnown RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 GAGE1Q13065 139 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 PDLIM3Q53GG5 364 aaPredicted RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 ZNF705AQ6ZN79 300 aaPredicted RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 MDP1Q86V88 176 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 OR52L2PQ8NGH6 319 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 MBD3L2Q8NHZ7 208 aaPredicted RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 C5orf30Q96GV9 206 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 QTRT1Q9BXR0 403 aaKnown RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 HES4Q9HCC6 221 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 LY96Q9Y6Y9 160 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 TRBV9A0A0B4J1U6 114 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 A8MXE2 369 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 MT-CO2P00403 227 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 CRISP2P16562 243 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 G0S2P27469 103 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 RPL29P47914 159 aaKnown RBP9.31□□□□□ -0.92
ATF3-211ENST00000613954 ZNF90Q03938 601 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 SPATA46Q5T0L3 261 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 VWA1Q6PCB0 445 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 TOMM20LQ6UXN7 152 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 FAM216AQ8WUB2 273 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 SDSLQ96GA7 329 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 WFIKKN1Q96NZ8 548 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 PLSCR4Q9NRQ2 329 aa9.31□□□□□ -0.92
ATF3-211ENST00000613954 MED12LQ86YW9 2145 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 RBFOX2O43251 390 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATF3-211ENST00000613954 YPEL1O60688 119 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 EGR1P18146 543 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 UCNP55089 124 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 CASP6P55212 293 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 EDDM3BP56851 147 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 TMPRSS3P57727 454 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 TRAT1Q6PIZ9 186 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 OR52E5Q8NH55 327 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 YPEL2Q96QA6 119 aa9.3□□□□□ -0.92
ATF3-211ENST00000613954 AURKAIP1Q9NWT8 199 aaPredicted RBP9.3□□□□□ -0.92
ATF3-211ENST00000613954 TMEM238LA0A1B0GVL6 79 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 C9JCJ5 164 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 NUPR1O60356 82 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 PSPNO60542 156 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 SMPD2O60906 423 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 LYZL6O75951 148 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 ARL14EPLP0DKL9 152 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 DEFA4P12838 97 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 PLA2G5P39877 138 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 RPS16P62249 146 aaKnown RBP9.29□□□□□ -0.92
ATF3-211ENST00000613954 FOXF2Q12947 444 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 TPTE2P1Q5T6R2 138 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 C1orf185Q5T7R7 199 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 TREML4Q6UXN2 200 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 ZNF114Q8NC26 417 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 C1orf162Q8NEQ5 155 aaPredicted RBP9.29□□□□□ -0.92
ATF3-211ENST00000613954 OR5AU1Q8NGC0 362 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 PATZ1Q9HBE1 687 aaKnown RBP9.29□□□□□ -0.92
ATF3-211ENST00000613954 PROCRQ9UNN8 238 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.29□□□□□ -0.92
ATF3-211ENST00000613954 IQCF6A8MYZ5 107 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 DLEU1O43261 78 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 GABRA2P47869 451 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 Q0VG73 95 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 COX19Q49B96 90 aa9.29□□□□□ -0.92
ATF3-211ENST00000613954 GCSAMLQ5JQS6 135 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms