RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 ARPC5LQ9BPX5 153 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 NSG2Q9Y328 171 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 ABCA1O95477 2261 aa11.08□□□□□ -0.64
TMEM254-213ENST00000613758 RPS10-NUDT3A0A1W2PQS6 291 aa11.08□□□□□ -0.64
TMEM254-213ENST00000613758 NQO2P16083 231 aa11.08□□□□□ -0.64
TMEM254-213ENST00000613758 RPL12P30050 165 aaKnown RBP11.08□□□□□ -0.64
TMEM254-213ENST00000613758 NDUFA5Q16718 116 aa11.08□□□□□ -0.64
TMEM254-213ENST00000613758 TMEM177Q53S58 311 aa11.08□□□□□ -0.64
TMEM254-213ENST00000613758 OR4C13Q8NGP0 309 aa11.08□□□□□ -0.64
TMEM254-213ENST00000613758 CFHR4Q92496 578 aa11.08□□□□□ -0.64
TMEM254-213ENST00000613758 MARCH11A6NNE9 402 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 SHOXO15266 292 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 SPDEFO95238 335 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 HRASP01112 189 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 CD1BP29016 333 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 NUP62P37198 522 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 ERVK-16P61578 105 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 RPS16P62249 146 aaKnown RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 HABP2Q14520 560 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 H2BFWTQ7Z2G1 175 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 VKORC1L1Q8N0U8 176 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 OSR1Q8TAX0 266 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 MAGT1Q9H0U3 335 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 CACNG5Q9UF02 275 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 MMP24Q9Y5R2 645 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 SRRM4A7MD48 611 aaKnown RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 NXPH3O95157 252 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 P2RY1P47900 373 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 UBA52P62987 128 aaKnown RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 KRTAP1-1Q07627 177 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 NANPQ8TBE9 248 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 RHOVQ96L33 236 aa11.07□□□□□ -0.64
TMEM254-213ENST00000613758 ZNF471Q9BX82 626 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 MS4A7Q9GZW8 240 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-213ENST00000613758 A0A0U1RQK1 487 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 CD5LO43866 347 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 VENTXO95231 258 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 ARHGDIBP52566 201 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 RITA1Q96K30 269 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 AIFM2Q9BRQ8 373 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 NUP50Q9UKX7 468 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 FAM96BQ9Y3D0 163 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 SOX21Q9Y651 276 aaPredicted RBP11.06□□□□□ -0.64
TMEM254-213ENST00000613758 TMEM50AO95807 157 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 CD24P25063 80 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 LGALS7P47929 136 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 PAX9P55771 341 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 BPIFB3P59826 476 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 SCARB1Q8WTV0 552 aa11.06□□□□□ -0.64
TMEM254-213ENST00000613758 PCNPQ8WW12 178 aaKnown RBP11.06□□□□□ -0.64
TMEM254-213ENST00000613758 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 SSSCA1O60232 199 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 GPR137BO60478 399 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 FSHBP01225 129 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 IGKV1D-33P01593 117 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 IGKV1-33P01594 117 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 BRS3P32247 399 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 CLEC9AQ6UXN8 241 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 STOML3Q8TAV4 291 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 MEGF9Q9H1U4 602 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 TMEM140Q9NV12 185 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 COA4Q9NYJ1 87 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
TMEM254-213ENST00000613758 CHST1O43916 411 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 MOSP00540 346 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 SNRNP70P08621 437 aaKnown RBP11.04□□□□□ -0.64
TMEM254-213ENST00000613758 OR4A47Q6IF82 309 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 RNF5Q99942 180 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 YAE1D1Q9NRH1 226 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
TMEM254-213ENST00000613758 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
TMEM254-213ENST00000613758 FAM24AA6NFZ4 105 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 FAM90A9PA6NNJ1 464 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 IGLV2-23P01705 113 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 OR9G9P0C7N8 305 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 HES1Q14469 280 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 HNF4GQ14541 408 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 FAM120AOSQ5T036 256 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 OR2C3Q8N628 320 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 OR2T10Q8NGZ9 312 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 EAF1Q96JC9 268 aaPredicted RBP11.04□□□□□ -0.64
TMEM254-213ENST00000613758 FBXL17Q9UF56 701 aa11.04□□□□□ -0.64
TMEM254-213ENST00000613758 TRAV3A0A0B4J244 114 aa11.03□□□□□ -0.64
TMEM254-213ENST00000613758 IGSF23A1L1A6 192 aa11.03□□□□□ -0.64
TMEM254-213ENST00000613758 FBP1P09467 338 aa11.03□□□□□ -0.64
TMEM254-213ENST00000613758 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
TMEM254-213ENST00000613758 NHLH2Q02577 135 aa11.03□□□□□ -0.64
TMEM254-213ENST00000613758 EBI3Q14213 229 aa11.03□□□□□ -0.64
TMEM254-213ENST00000613758 PUSL1Q8N0Z8 303 aaKnown RBP11.03□□□□□ -0.64
TMEM254-213ENST00000613758 BCL6BQ8N143 479 aaPredicted RBP11.03□□□□□ -0.64
TMEM254-213ENST00000613758 TSNAXQ99598 290 aaKnown RBP11.03□□□□□ -0.64
TMEM254-213ENST00000613758 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms