RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 OR1P1Q8NH06 330 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 GSX1Q9H4S2 264 aaPredicted RBP10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 TEX50A0A1B0GTY4 177 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 FAM90A26D6RGX4 464 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 ITGB1BP1O14713 200 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 SMPD2O60906 423 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 FOLR2P14207 255 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 P2RX4Q99571 388 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 GP6Q9HCN6 339 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 CLDN16Q9Y5I7 305 aa10.64□□□□□ -0.71
TNFAIP3-206ENST00000612899 PROB1E7EW31 1015 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 J3QW42 95 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 CD40P25942 277 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 DNLZQ5SXM8 178 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 LINC01560Q8TB33 94 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 EAF1Q96JC9 268 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 LOC102723996A0A087X1L8 192 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 PPIAL4CA0A0B4J2A2 164 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 PPIAL4GP0DN37 164 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 MST1P26927 711 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 SELENOTP62341 195 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 PSG7Q13046 419 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 TIMM23BQ5SRD1 257 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 C12orf77C9JDV5 145 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 RND3P61587 244 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 RIGQ13278 110 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 CLEC2AQ6UVW9 174 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 PRNTQ86SH4 94 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 C14orf144Q96I85 54 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 RARRES2Q99969 163 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 KLF7O75840 302 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 HSPB1P04792 205 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 TM2D1Q9BX74 207 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 TUBA4BQ9H853 241 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 DEPPQ9NTK1 212 aa10.63□□□□□ -0.71
TNFAIP3-206ENST00000612899 CD8AP01732 235 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 FAM3BP58499 235 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 ACSF3Q4G176 576 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 SNRNP40Q96DI7 357 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 OR2T8A6NH00 312 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 KBTBD11O94819 623 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 TRGC2P03986 189 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 MUC15Q8N387 334 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 OR4A5Q8NH83 315 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 C1QTNF5Q9BXJ0 243 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 PHF3Q92576 2039 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 REG1AP05451 166 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 CELA3BP08861 270 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 ELOBQ15370 118 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 PQLC2Q6ZP29 291 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 ZNF319Q9P2F9 582 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 MPDZO75970 2070 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 IGFBP3P17936 291 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 RPL39P5Q59GN2 51 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 OR9G1Q8NH87 305 aa10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 LSM10Q969L4 123 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-206ENST00000612899 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 PGPA6NDG6 321 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 ZFP36L1Q07352 338 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 SLC35E4Q6ICL7 350 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 ABHD17AQ96GS6 310 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 DCTN5Q9BTE1 182 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 SCNM1Q9BWG6 230 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 IGKV1-9A0A0C4DH69 117 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 IGHV1-69-2A0A0G2JMI3 117 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 NIT1Q86X76 327 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 DLL1O00548 723 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 Q1RN00 199 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 DHRS11Q6UWP2 260 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 OR4C13Q8NGP0 309 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 KLHDC3Q9BQ90 382 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 THADAQ6YHU6 1953 aa10.61□□□□□ -0.71
TNFAIP3-206ENST00000612899 DANCRP0C864 163 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 IGHV1-2P23083 117 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 LRRC75BQ2VPJ9 315 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 ACP7Q6ZNF0 438 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 MRPL52Q86TS9 123 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 VN1R17PQ8TDU5 208 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 ZNF735P0CB33 412 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 LHX2P50458 406 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 NUBP1P53384 320 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 LOXL3P58215 753 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 QTRT1Q9BXR0 403 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 RPRMQ9NS64 109 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 CORTO00230 105 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 ISLRO14498 428 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 FAM106CPP0CH98 169 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 PF4V1P10720 104 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 CLDN18P56856 261 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 DGAT2L7PQ6IED9 249 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 TMEM183AQ8IXX5 376 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 SMIM8Q96KF7 97 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 EFNA2O43921 213 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 LINC00271P0C7V0 271 aa10.6□□□□□ -0.71
TNFAIP3-206ENST00000612899 CEACAM1P13688 526 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms