RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 DCUN1D4Q92564 292 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 MALSU1Q96EH3 234 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 TNFSF18Q9UNG2 199 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 RCL1Q9Y2P8 373 aaKnown RBP11.09□□□□□ -0.63
MUC1-225ENST00000612778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.09□□□□□ -0.63
MUC1-225ENST00000612778 FAM90A9PA6NNJ1 464 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 RBMXL2O75526 392 aaKnown RBP11.09□□□□□ -0.63
MUC1-225ENST00000612778 IL6RP08887 468 aaPredicted RBP11.09□□□□□ -0.63
MUC1-225ENST00000612778 SAA1P0DJI8 122 aaPredicted RBP11.09□□□□□ -0.63
MUC1-225ENST00000612778 IGHV4-38-2P0DP08 117 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 OR2B8PP59922 312 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 RELBQ01201 579 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 EXOSC2Q13868 293 aaKnown RBP11.09□□□□□ -0.63
MUC1-225ENST00000612778 HABP2Q14520 560 aaPredicted RBP11.09□□□□□ -0.63
MUC1-225ENST00000612778 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 ITPR3Q14573 2671 aa11.09□□□□□ -0.63
MUC1-225ENST00000612778 VENTXO95231 258 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 IGLV2-23P01705 113 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 CD24P25063 80 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 CD1BP29016 333 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 S100A11P31949 105 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 ARHGDIBP52566 201 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 GPR157Q5UAW9 335 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 OR4A16Q8NH70 328 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
MUC1-225ENST00000612778 MFFQ9GZY8 342 aa11.08□□□□□ -0.64
MUC1-225ENST00000612778 J3QLI3 93 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 CHST1O43916 411 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 SSSCA1O60232 199 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 CFDP00746 253 aaPredicted RBP11.07□□□□□ -0.64
MUC1-225ENST00000612778 LGALS7P47929 136 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
MUC1-225ENST00000612778 TMUB2Q71RG4 321 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 PUSL1Q8N0Z8 303 aaKnown RBP11.07□□□□□ -0.64
MUC1-225ENST00000612778 CITED4Q96RK1 184 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 C11orf1Q9H5F2 150 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 BET1LQ9NYM9 111 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 HSPB7Q9UBY9 170 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 CR1P17927 2039 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 RNF222A6NCQ9 220 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 FAM90A26D6RGX4 464 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 E5RGE8 158 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 WRBO00258 174 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 UPK2O00526 184 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 TMEM50AO95807 157 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 CNTFRP26992 372 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 AP2S1P53680 142 aaPredicted RBP11.07□□□□□ -0.64
MUC1-225ENST00000612778 TNFRSF9Q07011 255 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 AARDQ4LEZ3 155 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 CYB5R2Q6BCY4 276 aa11.07□□□□□ -0.64
MUC1-225ENST00000612778 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
MUC1-225ENST00000612778 NOTCH2Q04721 2471 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 SETXQ7Z333 2677 aaKnown RBP11.06□□□□□ -0.64
MUC1-225ENST00000612778 CELSR1Q9NYQ6 3014 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 C15orf61A6NNL5 157 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
MUC1-225ENST00000612778 SYNGR2O43760 224 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 SLC25A17O43808 307 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 IGKV1D-33P01593 117 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 IGKV1-33P01594 117 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 UBE2KP61086 200 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 ACOT7LQ6ZUV0 252 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 INO80EQ8NBZ0 244 aaPredicted RBP11.06□□□□□ -0.64
MUC1-225ENST00000612778 RBKSQ9H477 322 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 AKAP9Q99996 3911 aa11.06□□□□□ -0.64
MUC1-225ENST00000612778 KBTBD11O94819 623 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 MOSP00540 346 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 SNRNP70P08621 437 aaKnown RBP11.05□□□□□ -0.64
MUC1-225ENST00000612778 MYOD1P15172 320 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 PAX9P55771 341 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 HNF4GQ14541 408 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 VMA21Q3ZAQ7 101 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 FBLN7Q53RD9 439 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 SPINK9Q5DT21 86 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 ZNF429Q86V71 674 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 VSTM2AQ8TAG5 236 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
MUC1-225ENST00000612778 RNF5Q99942 180 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 TMEM14BQ9NUH8 114 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
MUC1-225ENST00000612778 A0A0U1RQK1 487 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 IFNA17P01571 189 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 HKR1P10072 659 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 IAPPP10997 89 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 PVALBP20472 110 aaPredicted RBP11.05□□□□□ -0.64
MUC1-225ENST00000612778 P2RY1P47900 373 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 VAMP2P63027 116 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 HES1Q14469 280 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 PSG5Q15238 335 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 TMEM167AQ8TBQ9 72 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 AQP10Q96PS8 301 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 TSNAXQ99598 290 aaKnown RBP11.05□□□□□ -0.64
MUC1-225ENST00000612778 ARL6Q9H0F7 186 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 TPSG1Q9NRR2 321 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms