RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CLN5O75503 358 aa11.59□□□□□ -0.55
PCDHGA3-202ENST00000612467 FCN3O75636 299 aa11.59□□□□□ -0.55
PCDHGA3-202ENST00000612467 IFNA4P05014 189 aa11.59□□□□□ -0.55
PCDHGA3-202ENST00000612467 CEACAM8P31997 349 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA3-202ENST00000612467 TIMP3P35625 211 aa11.59□□□□□ -0.55
PCDHGA3-202ENST00000612467 MEF2BQ02080 365 aaPredicted RBP11.59□□□□□ -0.55
PCDHGA3-202ENST00000612467 ZNF251Q9BRH9 671 aa11.59□□□□□ -0.55
PCDHGA3-202ENST00000612467 ABCA4P78363 2273 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 NDUFB7P17568 137 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 CD1BP29016 333 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 MZT1Q08AG7 82 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 MIC13Q5XKP0 118 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 STUMQ69YW2 141 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 MOB3BQ86TA1 216 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 ZNF709Q8N972 641 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 PPP1R35Q8TAP8 253 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 MS4A5Q9H3V2 200 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 CTXND1A0A1B0GTU2 59 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 GFRA3O60609 400 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 IGKV1-16P04430 117 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 NPPCP23582 126 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 CFHR2P36980 270 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 DDB2Q92466 427 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 NEUROG1Q92886 237 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 ELOVL1Q9BW60 279 aa11.58□□□□□ -0.56
PCDHGA3-202ENST00000612467 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 PGPEP1LA6NFU8 196 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 CCL3L1P16619 93 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 VDAC2P45880 294 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 CENPVQ7Z7K6 275 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 RHOVQ96L33 236 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 DERL1Q9BUN8 251 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 SFXN3Q9BWM7 321 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 PARLQ9H300 379 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 TCF19Q9Y242 345 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 TIMM9Q9Y5J7 89 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 A0A087WWC5 75 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 AP4M1O00189 453 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 ATP5G3P48201 142 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 REG1BP48304 166 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 ERVK-16P61578 105 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 MRPS11P82912 194 aaKnown RBP11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 BSPH1Q075Z2 132 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 OR4A47Q6IF82 309 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 TRAT1Q6PIZ9 186 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 TREML4Q6UXN2 200 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 Q8NA96 180 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 MALSU1Q96EH3 234 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 C1orf159Q96HA4 380 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 LAMP3Q9UQV4 416 aa11.57□□□□□ -0.56
PCDHGA3-202ENST00000612467 NAV3Q8IVL0 2385 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 CRYABP02511 175 aaKnown RBP11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 THBDP07204 575 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 MAS1LP35410 378 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 DLX1P56177 255 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 GNB2P62879 340 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 PAX5Q02548 391 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 ATP6V1FQ16864 119 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 CR1LQ2VPA4 569 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 MGST2Q99735 147 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 DOK5Q9P104 306 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 TRGV10A0A0A0MS01 117 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 SRRM4A7MD48 611 aaKnown RBP11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 OR4A8P0C604 315 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 CDC34P49427 236 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 SPATA31B1PQ5VZV4 182 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 C16orf82Q7Z2V1 217 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 ACTR3CQ9C0K3 210 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 METTL1Q9UBP6 276 aaKnown RBP11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 WDR83OSQ9Y284 106 aa11.56□□□□□ -0.56
PCDHGA3-202ENST00000612467 PSMB3P49720 205 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 SPCS3P61009 180 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 FOXC1Q12948 553 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 DIAPH2-AS1Q14236 149 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 ADIPOQQ15848 244 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 FRZBQ92765 325 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 IL19Q9UHD0 177 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 IFNA1P01562 189 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 RPL23P62829 140 aaKnown RBP11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 MLANAQ16655 118 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms